Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1256 and Echvi_1257 are separated by 473 nucleotides Echvi_1257 and Echvi_1258 are separated by 72 nucleotides Echvi_1258 and Echvi_1259 are separated by 23 nucleotides
Echvi_1256: Echvi_1256 - Predicted transcriptional regulators, at 1,441,974 to 1,442,873
_1256
Echvi_1257: Echvi_1257 - Transcriptional regulator, at 1,443,347 to 1,443,997
_1257
Echvi_1258: Echvi_1258 - Peptide methionine sulfoxide reductase, at 1,444,070 to 1,444,555
_1258
Echvi_1259: Echvi_1259 - methionine-R-sulfoxide reductase, at 1,444,579 to 1,445,022
_1259
Position (kb)
1443
1444 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1442.377 kb on + strand, within Echvi_1256 at 1442.395 kb on + strand, within Echvi_1256 at 1442.476 kb on + strand, within Echvi_1256 at 1442.476 kb on + strand, within Echvi_1256 at 1442.476 kb on + strand, within Echvi_1256 at 1442.476 kb on + strand, within Echvi_1256 at 1442.478 kb on + strand, within Echvi_1256 at 1442.478 kb on + strand, within Echvi_1256 at 1442.479 kb on - strand, within Echvi_1256 at 1442.556 kb on + strand, within Echvi_1256 at 1442.556 kb on + strand, within Echvi_1256 at 1442.557 kb on - strand, within Echvi_1256 at 1442.580 kb on - strand, within Echvi_1256 at 1442.589 kb on + strand, within Echvi_1256 at 1442.604 kb on - strand, within Echvi_1256 at 1442.604 kb on - strand, within Echvi_1256 at 1442.669 kb on + strand, within Echvi_1256 at 1442.669 kb on + strand, within Echvi_1256 at 1442.669 kb on + strand, within Echvi_1256 at 1442.669 kb on + strand, within Echvi_1256 at 1442.670 kb on - strand, within Echvi_1256 at 1442.670 kb on - strand, within Echvi_1256 at 1442.670 kb on - strand, within Echvi_1256 at 1442.673 kb on - strand, within Echvi_1256 at 1442.673 kb on - strand, within Echvi_1256 at 1442.704 kb on - strand, within Echvi_1256 at 1442.704 kb on - strand, within Echvi_1256 at 1442.748 kb on - strand, within Echvi_1256 at 1442.779 kb on + strand, within Echvi_1256 at 1442.779 kb on + strand, within Echvi_1256 at 1442.779 kb on + strand, within Echvi_1256 at 1442.780 kb on - strand, within Echvi_1256 at 1442.780 kb on - strand, within Echvi_1256 at 1442.790 kb on - strand at 1442.836 kb on + strand at 1442.836 kb on + strand at 1442.837 kb on - strand at 1443.000 kb on + strand at 1443.004 kb on + strand at 1443.004 kb on + strand at 1443.007 kb on + strand at 1443.039 kb on - strand at 1443.152 kb on - strand at 1443.197 kb on - strand at 1443.200 kb on + strand at 1443.246 kb on + strand at 1443.250 kb on + strand at 1443.251 kb on - strand at 1443.254 kb on - strand at 1443.257 kb on + strand at 1443.257 kb on + strand at 1443.258 kb on - strand at 1443.258 kb on - strand at 1443.258 kb on - strand at 1443.258 kb on - strand at 1443.258 kb on - strand at 1443.260 kb on + strand at 1443.260 kb on + strand at 1443.260 kb on + strand at 1443.261 kb on - strand at 1443.261 kb on - strand at 1443.299 kb on + strand at 1443.300 kb on - strand at 1443.303 kb on + strand at 1443.340 kb on - strand at 1443.400 kb on + strand at 1443.407 kb on + strand at 1443.408 kb on - strand at 1443.408 kb on - strand at 1443.427 kb on + strand, within Echvi_1257 at 1443.427 kb on + strand, within Echvi_1257 at 1443.427 kb on + strand, within Echvi_1257 at 1443.428 kb on - strand, within Echvi_1257 at 1443.430 kb on + strand, within Echvi_1257 at 1443.431 kb on - strand, within Echvi_1257 at 1443.431 kb on - strand, within Echvi_1257 at 1443.440 kb on - strand, within Echvi_1257 at 1443.440 kb on - strand, within Echvi_1257 at 1443.445 kb on + strand, within Echvi_1257 at 1443.445 kb on + strand, within Echvi_1257 at 1443.486 kb on - strand, within Echvi_1257 at 1443.494 kb on - strand, within Echvi_1257 at 1443.524 kb on + strand, within Echvi_1257 at 1443.524 kb on + strand, within Echvi_1257 at 1443.524 kb on + strand, within Echvi_1257 at 1443.525 kb on - strand, within Echvi_1257 at 1443.525 kb on - strand, within Echvi_1257 at 1443.525 kb on - strand, within Echvi_1257 at 1443.526 kb on + strand, within Echvi_1257 at 1443.558 kb on - strand, within Echvi_1257 at 1443.564 kb on + strand, within Echvi_1257 at 1443.564 kb on + strand, within Echvi_1257 at 1443.565 kb on - strand, within Echvi_1257 at 1443.565 kb on - strand, within Echvi_1257 at 1443.565 kb on - strand, within Echvi_1257 at 1443.639 kb on - strand, within Echvi_1257 at 1443.681 kb on - strand, within Echvi_1257 at 1443.690 kb on + strand, within Echvi_1257 at 1443.757 kb on + strand, within Echvi_1257 at 1443.794 kb on + strand, within Echvi_1257 at 1443.795 kb on - strand, within Echvi_1257 at 1443.795 kb on - strand, within Echvi_1257 at 1443.817 kb on + strand, within Echvi_1257 at 1443.817 kb on + strand, within Echvi_1257 at 1443.817 kb on + strand, within Echvi_1257 at 1443.817 kb on + strand, within Echvi_1257 at 1443.817 kb on + strand, within Echvi_1257 at 1443.818 kb on - strand, within Echvi_1257 at 1443.819 kb on + strand, within Echvi_1257 at 1443.823 kb on + strand, within Echvi_1257 at 1443.823 kb on + strand, within Echvi_1257 at 1443.824 kb on - strand, within Echvi_1257 at 1443.824 kb on - strand, within Echvi_1257 at 1443.832 kb on + strand, within Echvi_1257 at 1443.859 kb on - strand, within Echvi_1257 at 1443.882 kb on + strand, within Echvi_1257 at 1443.905 kb on - strand, within Echvi_1257 at 1443.928 kb on + strand, within Echvi_1257 at 1443.928 kb on + strand, within Echvi_1257 at 1443.928 kb on + strand, within Echvi_1257 at 1443.928 kb on + strand, within Echvi_1257 at 1443.929 kb on - strand, within Echvi_1257 at 1443.929 kb on - strand, within Echvi_1257 at 1443.929 kb on - strand, within Echvi_1257 at 1443.929 kb on - strand, within Echvi_1257 at 1443.929 kb on - strand, within Echvi_1257 at 1443.974 kb on + strand at 1443.975 kb on - strand at 1443.987 kb on - strand at 1444.017 kb on + strand at 1444.018 kb on - strand at 1444.018 kb on - strand at 1444.050 kb on + strand at 1444.050 kb on + strand at 1444.050 kb on + strand at 1444.051 kb on - strand at 1444.086 kb on + strand at 1444.087 kb on - strand at 1444.107 kb on - strand at 1444.115 kb on + strand at 1444.129 kb on + strand, within Echvi_1258 at 1444.129 kb on + strand, within Echvi_1258 at 1444.130 kb on - strand, within Echvi_1258 at 1444.170 kb on + strand, within Echvi_1258 at 1444.171 kb on - strand, within Echvi_1258 at 1444.253 kb on + strand, within Echvi_1258 at 1444.253 kb on + strand, within Echvi_1258 at 1444.295 kb on - strand, within Echvi_1258 at 1444.305 kb on + strand, within Echvi_1258 at 1444.336 kb on + strand, within Echvi_1258 at 1444.364 kb on + strand, within Echvi_1258 at 1444.364 kb on + strand, within Echvi_1258 at 1444.365 kb on - strand, within Echvi_1258 at 1444.410 kb on + strand, within Echvi_1258 at 1444.410 kb on + strand, within Echvi_1258 at 1444.410 kb on + strand, within Echvi_1258 at 1444.411 kb on - strand, within Echvi_1258 at 1444.421 kb on + strand, within Echvi_1258 at 1444.421 kb on + strand, within Echvi_1258 at 1444.421 kb on + strand, within Echvi_1258 at 1444.422 kb on - strand, within Echvi_1258 at 1444.453 kb on + strand, within Echvi_1258 at 1444.516 kb on + strand at 1444.517 kb on - strand at 1444.561 kb on + strand at 1444.562 kb on - strand at 1444.562 kb on - strand at 1444.562 kb on - strand at 1444.580 kb on + strand at 1444.581 kb on - strand at 1444.616 kb on + strand at 1444.748 kb on - strand, within Echvi_1259 at 1444.924 kb on + strand, within Echvi_1259 at 1444.927 kb on + strand, within Echvi_1259 at 1444.927 kb on + strand, within Echvi_1259 at 1444.928 kb on - strand, within Echvi_1259
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,442,377 + Echvi_1256 0.45 -0.2 1,442,395 + Echvi_1256 0.47 -1.5 1,442,476 + Echvi_1256 0.56 -1.7 1,442,476 + Echvi_1256 0.56 +0.3 1,442,476 + Echvi_1256 0.56 -0.7 1,442,476 + Echvi_1256 0.56 -1.5 1,442,478 + Echvi_1256 0.56 -2.0 1,442,478 + Echvi_1256 0.56 -1.8 1,442,479 - Echvi_1256 0.56 -1.3 1,442,556 + Echvi_1256 0.65 -2.7 1,442,556 + Echvi_1256 0.65 -1.9 1,442,557 - Echvi_1256 0.65 +0.7 1,442,580 - Echvi_1256 0.67 -1.0 1,442,589 + Echvi_1256 0.68 +0.0 1,442,604 - Echvi_1256 0.70 -1.9 1,442,604 - Echvi_1256 0.70 -2.5 1,442,669 + Echvi_1256 0.77 +0.6 1,442,669 + Echvi_1256 0.77 -0.2 1,442,669 + Echvi_1256 0.77 -1.6 1,442,669 + Echvi_1256 0.77 -1.6 1,442,670 - Echvi_1256 0.77 +0.6 1,442,670 - Echvi_1256 0.77 -3.8 1,442,670 - Echvi_1256 0.77 -2.0 1,442,673 - Echvi_1256 0.78 -2.1 1,442,673 - Echvi_1256 0.78 -0.6 1,442,704 - Echvi_1256 0.81 -3.6 1,442,704 - Echvi_1256 0.81 -1.1 1,442,748 - Echvi_1256 0.86 -3.4 1,442,779 + Echvi_1256 0.89 -3.6 1,442,779 + Echvi_1256 0.89 -1.9 1,442,779 + Echvi_1256 0.89 -2.6 1,442,780 - Echvi_1256 0.90 -3.2 1,442,780 - Echvi_1256 0.90 -1.4 1,442,790 - -2.2 1,442,836 + +0.8 1,442,836 + -2.3 1,442,837 - +2.1 1,443,000 + +1.4 1,443,004 + +0.5 1,443,004 + +0.6 1,443,007 + +1.3 1,443,039 - -0.2 1,443,152 - -1.5 1,443,197 - -1.0 1,443,200 + +0.1 1,443,246 + +0.4 1,443,250 + -0.6 1,443,251 - +0.7 1,443,254 - +0.5 1,443,257 + +0.8 1,443,257 + +1.4 1,443,258 - -0.4 1,443,258 - +1.0 1,443,258 - +1.8 1,443,258 - -1.1 1,443,258 - -2.0 1,443,260 + -2.4 1,443,260 + +1.9 1,443,260 + -0.6 1,443,261 - -0.9 1,443,261 - -2.8 1,443,299 + -0.4 1,443,300 - +0.9 1,443,303 + -0.6 1,443,340 - +0.7 1,443,400 + -1.7 1,443,407 + +0.6 1,443,408 - +0.0 1,443,408 - -1.2 1,443,427 + Echvi_1257 0.12 -0.9 1,443,427 + Echvi_1257 0.12 -0.6 1,443,427 + Echvi_1257 0.12 +1.6 1,443,428 - Echvi_1257 0.12 -0.4 1,443,430 + Echvi_1257 0.13 -1.1 1,443,431 - Echvi_1257 0.13 -0.3 1,443,431 - Echvi_1257 0.13 -0.8 1,443,440 - Echvi_1257 0.14 -1.7 1,443,440 - Echvi_1257 0.14 -0.4 1,443,445 + Echvi_1257 0.15 +0.1 1,443,445 + Echvi_1257 0.15 -0.6 1,443,486 - Echvi_1257 0.21 -1.2 1,443,494 - Echvi_1257 0.23 +0.6 1,443,524 + Echvi_1257 0.27 -1.3 1,443,524 + Echvi_1257 0.27 -1.0 1,443,524 + Echvi_1257 0.27 -0.6 1,443,525 - Echvi_1257 0.27 -0.1 1,443,525 - Echvi_1257 0.27 +1.6 1,443,525 - Echvi_1257 0.27 +0.2 1,443,526 + Echvi_1257 0.27 -0.6 1,443,558 - Echvi_1257 0.32 -1.3 1,443,564 + Echvi_1257 0.33 -1.1 1,443,564 + Echvi_1257 0.33 +0.0 1,443,565 - Echvi_1257 0.33 +0.1 1,443,565 - Echvi_1257 0.33 -0.7 1,443,565 - Echvi_1257 0.33 -0.2 1,443,639 - Echvi_1257 0.45 -1.6 1,443,681 - Echvi_1257 0.51 -0.5 1,443,690 + Echvi_1257 0.53 -0.2 1,443,757 + Echvi_1257 0.63 +1.0 1,443,794 + Echvi_1257 0.69 +0.7 1,443,795 - Echvi_1257 0.69 +0.5 1,443,795 - Echvi_1257 0.69 +0.1 1,443,817 + Echvi_1257 0.72 -1.7 1,443,817 + Echvi_1257 0.72 -0.9 1,443,817 + Echvi_1257 0.72 +1.0 1,443,817 + Echvi_1257 0.72 +2.6 1,443,817 + Echvi_1257 0.72 -1.2 1,443,818 - Echvi_1257 0.72 -2.2 1,443,819 + Echvi_1257 0.73 +0.2 1,443,823 + Echvi_1257 0.73 -1.6 1,443,823 + Echvi_1257 0.73 -1.2 1,443,824 - Echvi_1257 0.73 +0.5 1,443,824 - Echvi_1257 0.73 +0.4 1,443,832 + Echvi_1257 0.75 +1.0 1,443,859 - Echvi_1257 0.79 -0.6 1,443,882 + Echvi_1257 0.82 -2.0 1,443,905 - Echvi_1257 0.86 -0.1 1,443,928 + Echvi_1257 0.89 -1.2 1,443,928 + Echvi_1257 0.89 -0.9 1,443,928 + Echvi_1257 0.89 -1.9 1,443,928 + Echvi_1257 0.89 -1.2 1,443,929 - Echvi_1257 0.89 +0.1 1,443,929 - Echvi_1257 0.89 -1.6 1,443,929 - Echvi_1257 0.89 -1.2 1,443,929 - Echvi_1257 0.89 -1.0 1,443,929 - Echvi_1257 0.89 -0.8 1,443,974 + -2.3 1,443,975 - -1.3 1,443,987 - +3.0 1,444,017 + -1.2 1,444,018 - -1.5 1,444,018 - +0.2 1,444,050 + +0.4 1,444,050 + -1.9 1,444,050 + -0.6 1,444,051 - -0.2 1,444,086 + +0.3 1,444,087 - -0.5 1,444,107 - +0.0 1,444,115 + +0.6 1,444,129 + Echvi_1258 0.12 -1.3 1,444,129 + Echvi_1258 0.12 +0.1 1,444,130 - Echvi_1258 0.12 +0.2 1,444,170 + Echvi_1258 0.21 -1.4 1,444,171 - Echvi_1258 0.21 +1.4 1,444,253 + Echvi_1258 0.38 -0.4 1,444,253 + Echvi_1258 0.38 +0.1 1,444,295 - Echvi_1258 0.46 +0.5 1,444,305 + Echvi_1258 0.48 +1.0 1,444,336 + Echvi_1258 0.55 -3.2 1,444,364 + Echvi_1258 0.60 +0.4 1,444,364 + Echvi_1258 0.60 +0.4 1,444,365 - Echvi_1258 0.61 +0.4 1,444,410 + Echvi_1258 0.70 +0.1 1,444,410 + Echvi_1258 0.70 +0.0 1,444,410 + Echvi_1258 0.70 +0.3 1,444,411 - Echvi_1258 0.70 -1.5 1,444,421 + Echvi_1258 0.72 +0.8 1,444,421 + Echvi_1258 0.72 -0.3 1,444,421 + Echvi_1258 0.72 +1.6 1,444,422 - Echvi_1258 0.72 +0.3 1,444,453 + Echvi_1258 0.79 +2.4 1,444,516 + +0.6 1,444,517 - -0.6 1,444,561 + -0.4 1,444,562 - +0.4 1,444,562 - +0.3 1,444,562 - +0.6 1,444,580 + +0.3 1,444,581 - -1.1 1,444,616 + +0.2 1,444,748 - Echvi_1259 0.38 +0.0 1,444,924 + Echvi_1259 0.78 -1.8 1,444,927 + Echvi_1259 0.78 -0.9 1,444,927 + Echvi_1259 0.78 -0.3 1,444,928 - Echvi_1259 0.79 -2.0
Or see this region's nucleotide sequence