Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0923

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0922 and Echvi_0923 overlap by 23 nucleotidesEchvi_0923 and Echvi_0924 are separated by 206 nucleotides Echvi_0922: Echvi_0922 - Uncharacterized protein conserved in bacteria, at 1,055,742 to 1,056,917 _0922 Echvi_0923: Echvi_0923 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 1,056,895 to 1,057,947 _0923 Echvi_0924: Echvi_0924 - Alcohol dehydrogenase, class IV, at 1,058,154 to 1,059,299 _0924 Position (kb) 1056 1057 1058Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1056.046 kb on + strand, within Echvi_0922at 1056.124 kb on + strand, within Echvi_0922at 1056.215 kb on + strand, within Echvi_0922at 1056.215 kb on + strand, within Echvi_0922at 1056.215 kb on + strand, within Echvi_0922at 1056.370 kb on + strand, within Echvi_0922at 1056.371 kb on - strand, within Echvi_0922at 1056.405 kb on - strand, within Echvi_0922at 1056.405 kb on - strand, within Echvi_0922at 1056.445 kb on + strand, within Echvi_0922at 1056.456 kb on + strand, within Echvi_0922at 1056.483 kb on + strand, within Echvi_0922at 1056.509 kb on + strand, within Echvi_0922at 1056.556 kb on + strand, within Echvi_0922at 1056.557 kb on - strand, within Echvi_0922at 1056.557 kb on - strand, within Echvi_0922at 1056.557 kb on - strand, within Echvi_0922at 1056.559 kb on + strand, within Echvi_0922at 1056.559 kb on + strand, within Echvi_0922at 1056.560 kb on - strand, within Echvi_0922at 1056.560 kb on - strand, within Echvi_0922at 1056.589 kb on + strand, within Echvi_0922at 1056.590 kb on - strand, within Echvi_0922at 1056.623 kb on + strand, within Echvi_0922at 1056.649 kb on - strand, within Echvi_0922at 1056.864 kb on + strandat 1056.865 kb on - strandat 1056.894 kb on - strandat 1056.903 kb on + strandat 1056.951 kb on - strandat 1056.961 kb on + strandat 1056.962 kb on - strandat 1057.032 kb on + strand, within Echvi_0923at 1057.056 kb on + strand, within Echvi_0923at 1057.056 kb on + strand, within Echvi_0923at 1057.057 kb on - strand, within Echvi_0923at 1057.057 kb on - strand, within Echvi_0923at 1057.057 kb on - strand, within Echvi_0923at 1057.057 kb on - strand, within Echvi_0923at 1057.073 kb on - strand, within Echvi_0923at 1057.098 kb on + strand, within Echvi_0923at 1057.098 kb on + strand, within Echvi_0923at 1057.098 kb on + strand, within Echvi_0923at 1057.123 kb on - strand, within Echvi_0923at 1057.131 kb on + strand, within Echvi_0923at 1057.131 kb on + strand, within Echvi_0923at 1057.148 kb on + strand, within Echvi_0923at 1057.148 kb on + strand, within Echvi_0923at 1057.148 kb on + strand, within Echvi_0923at 1057.148 kb on + strand, within Echvi_0923at 1057.148 kb on + strand, within Echvi_0923at 1057.149 kb on - strand, within Echvi_0923at 1057.169 kb on + strand, within Echvi_0923at 1057.169 kb on + strand, within Echvi_0923at 1057.169 kb on + strand, within Echvi_0923at 1057.170 kb on - strandat 1057.181 kb on - strand, within Echvi_0923at 1057.181 kb on - strand, within Echvi_0923at 1057.210 kb on + strand, within Echvi_0923at 1057.210 kb on + strand, within Echvi_0923at 1057.253 kb on - strand, within Echvi_0923at 1057.262 kb on - strand, within Echvi_0923at 1057.318 kb on - strand, within Echvi_0923at 1057.520 kb on + strand, within Echvi_0923at 1057.520 kb on + strand, within Echvi_0923at 1057.521 kb on - strand, within Echvi_0923at 1057.522 kb on + strand, within Echvi_0923at 1057.541 kb on + strand, within Echvi_0923at 1057.542 kb on - strand, within Echvi_0923at 1057.542 kb on - strand, within Echvi_0923at 1057.600 kb on + strand, within Echvi_0923at 1057.600 kb on + strand, within Echvi_0923at 1057.600 kb on + strand, within Echvi_0923at 1057.600 kb on + strand, within Echvi_0923at 1057.601 kb on - strand, within Echvi_0923at 1057.626 kb on + strand, within Echvi_0923at 1057.627 kb on - strand, within Echvi_0923at 1057.720 kb on + strand, within Echvi_0923at 1057.720 kb on + strand, within Echvi_0923at 1057.720 kb on + strand, within Echvi_0923at 1057.720 kb on + strand, within Echvi_0923at 1057.726 kb on + strand, within Echvi_0923at 1057.814 kb on - strand, within Echvi_0923at 1057.835 kb on - strand, within Echvi_0923at 1057.888 kb on - strandat 1057.932 kb on + strandat 1057.974 kb on - strandat 1058.014 kb on - strandat 1058.014 kb on - strandat 1058.019 kb on - strandat 1058.024 kb on - strandat 1058.033 kb on + strandat 1058.033 kb on + strandat 1058.033 kb on + strandat 1058.037 kb on + strandat 1058.037 kb on + strandat 1058.042 kb on + strandat 1058.114 kb on + strandat 1058.122 kb on - strandat 1058.127 kb on + strandat 1058.128 kb on - strandat 1058.136 kb on + strandat 1058.288 kb on + strand, within Echvi_0924at 1058.434 kb on + strand, within Echvi_0924at 1058.434 kb on + strand, within Echvi_0924at 1058.435 kb on - strand, within Echvi_0924at 1058.488 kb on + strand, within Echvi_0924at 1058.488 kb on + strand, within Echvi_0924at 1058.488 kb on + strand, within Echvi_0924at 1058.489 kb on - strand, within Echvi_0924at 1058.489 kb on - strand, within Echvi_0924at 1058.506 kb on + strand, within Echvi_0924at 1058.521 kb on - strand, within Echvi_0924at 1058.535 kb on + strand, within Echvi_0924at 1058.560 kb on + strand, within Echvi_0924at 1058.560 kb on + strand, within Echvi_0924at 1058.567 kb on + strand, within Echvi_0924at 1058.625 kb on + strand, within Echvi_0924at 1058.625 kb on + strand, within Echvi_0924at 1058.626 kb on - strand, within Echvi_0924at 1058.662 kb on + strand, within Echvi_0924at 1058.663 kb on - strand, within Echvi_0924at 1058.699 kb on - strand, within Echvi_0924at 1058.706 kb on + strand, within Echvi_0924at 1058.707 kb on - strand, within Echvi_0924at 1058.727 kb on + strand, within Echvi_0924at 1058.727 kb on + strand, within Echvi_0924at 1058.728 kb on - strand, within Echvi_0924at 1058.898 kb on + strand, within Echvi_0924at 1058.900 kb on + strand, within Echvi_0924at 1058.900 kb on + strand, within Echvi_0924at 1058.901 kb on - strand, within Echvi_0924at 1058.901 kb on - strand, within Echvi_0924at 1058.909 kb on + strand, within Echvi_0924at 1058.909 kb on + strand, within Echvi_0924at 1058.909 kb on + strand, within Echvi_0924at 1058.909 kb on + strand, within Echvi_0924at 1058.909 kb on + strand, within Echvi_0924at 1058.909 kb on + strand, within Echvi_0924at 1058.910 kb on - strand, within Echvi_0924at 1058.910 kb on - strand, within Echvi_0924at 1058.910 kb on - strand, within Echvi_0924at 1058.910 kb on - strand, within Echvi_0924at 1058.910 kb on - strand, within Echvi_0924at 1058.910 kb on - strand, within Echvi_0924at 1058.910 kb on - strand, within Echvi_0924at 1058.938 kb on - strand, within Echvi_0924at 1058.943 kb on + strand, within Echvi_0924

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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1,056,046 + Echvi_0922 0.26 -1.0
1,056,124 + Echvi_0922 0.32 +0.9
1,056,215 + Echvi_0922 0.40 -1.0
1,056,215 + Echvi_0922 0.40 +3.2
1,056,215 + Echvi_0922 0.40 +1.2
1,056,370 + Echvi_0922 0.53 -1.2
1,056,371 - Echvi_0922 0.53 -0.2
1,056,405 - Echvi_0922 0.56 -0.2
1,056,405 - Echvi_0922 0.56 -1.4
1,056,445 + Echvi_0922 0.60 +0.1
1,056,456 + Echvi_0922 0.61 -0.9
1,056,483 + Echvi_0922 0.63 -0.6
1,056,509 + Echvi_0922 0.65 -1.3
1,056,556 + Echvi_0922 0.69 +1.6
1,056,557 - Echvi_0922 0.69 -0.8
1,056,557 - Echvi_0922 0.69 +1.6
1,056,557 - Echvi_0922 0.69 -0.1
1,056,559 + Echvi_0922 0.69 +0.4
1,056,559 + Echvi_0922 0.69 +1.3
1,056,560 - Echvi_0922 0.70 +0.0
1,056,560 - Echvi_0922 0.70 -0.7
1,056,589 + Echvi_0922 0.72 -0.0
1,056,590 - Echvi_0922 0.72 +0.1
1,056,623 + Echvi_0922 0.75 -1.0
1,056,649 - Echvi_0922 0.77 +0.3
1,056,864 + -1.6
1,056,865 - -1.2
1,056,894 - +0.3
1,056,903 + -0.6
1,056,951 - +2.6
1,056,961 + -0.9
1,056,962 - +0.0
1,057,032 + Echvi_0923 0.13 -2.2
1,057,056 + Echvi_0923 0.15 +0.1
1,057,056 + Echvi_0923 0.15 +1.0
1,057,057 - Echvi_0923 0.15 -1.7
1,057,057 - Echvi_0923 0.15 +0.8
1,057,057 - Echvi_0923 0.15 -0.4
1,057,057 - Echvi_0923 0.15 -0.4
1,057,073 - Echvi_0923 0.17 +0.5
1,057,098 + Echvi_0923 0.19 +1.4
1,057,098 + Echvi_0923 0.19 +0.8
1,057,098 + Echvi_0923 0.19 -1.7
1,057,123 - Echvi_0923 0.22 +1.9
1,057,131 + Echvi_0923 0.22 +0.7
1,057,131 + Echvi_0923 0.22 -1.0
1,057,148 + Echvi_0923 0.24 +0.3
1,057,148 + Echvi_0923 0.24 -0.9
1,057,148 + Echvi_0923 0.24 +0.8
1,057,148 + Echvi_0923 0.24 +1.5
1,057,148 + Echvi_0923 0.24 -0.2
1,057,149 - Echvi_0923 0.24 +0.4
1,057,169 + Echvi_0923 0.26 +0.8
1,057,169 + Echvi_0923 0.26 +0.5
1,057,169 + Echvi_0923 0.26 +0.3
1,057,170 - +0.6
1,057,181 - Echvi_0923 0.27 +0.7
1,057,181 - Echvi_0923 0.27 -0.2
1,057,210 + Echvi_0923 0.30 -0.2
1,057,210 + Echvi_0923 0.30 -0.2
1,057,253 - Echvi_0923 0.34 +0.8
1,057,262 - Echvi_0923 0.35 -1.4
1,057,318 - Echvi_0923 0.40 -1.1
1,057,520 + Echvi_0923 0.59 +0.0
1,057,520 + Echvi_0923 0.59 +0.3
1,057,521 - Echvi_0923 0.59 -0.6
1,057,522 + Echvi_0923 0.60 +0.5
1,057,541 + Echvi_0923 0.61 -0.4
1,057,542 - Echvi_0923 0.61 -2.7
1,057,542 - Echvi_0923 0.61 -0.1
1,057,600 + Echvi_0923 0.67 +3.0
1,057,600 + Echvi_0923 0.67 +0.9
1,057,600 + Echvi_0923 0.67 +0.5
1,057,600 + Echvi_0923 0.67 -0.2
1,057,601 - Echvi_0923 0.67 +1.7
1,057,626 + Echvi_0923 0.69 -2.3
1,057,627 - Echvi_0923 0.70 -0.4
1,057,720 + Echvi_0923 0.78 +1.0
1,057,720 + Echvi_0923 0.78 -1.1
1,057,720 + Echvi_0923 0.78 +1.3
1,057,720 + Echvi_0923 0.78 -1.5
1,057,726 + Echvi_0923 0.79 +1.7
1,057,814 - Echvi_0923 0.87 +0.2
1,057,835 - Echvi_0923 0.89 +0.0
1,057,888 - +1.1
1,057,932 + -0.6
1,057,974 - -0.1
1,058,014 - -1.7
1,058,014 - -0.4
1,058,019 - +1.6
1,058,024 - +0.1
1,058,033 + +0.3
1,058,033 + +0.3
1,058,033 + +0.7
1,058,037 + -0.3
1,058,037 + -1.7
1,058,042 + +0.3
1,058,114 + -0.1
1,058,122 - +0.8
1,058,127 + -1.6
1,058,128 - +0.8
1,058,136 + +0.2
1,058,288 + Echvi_0924 0.12 +0.1
1,058,434 + Echvi_0924 0.24 -1.1
1,058,434 + Echvi_0924 0.24 -1.8
1,058,435 - Echvi_0924 0.25 -3.0
1,058,488 + Echvi_0924 0.29 -2.4
1,058,488 + Echvi_0924 0.29 -0.2
1,058,488 + Echvi_0924 0.29 -1.3
1,058,489 - Echvi_0924 0.29 -0.8
1,058,489 - Echvi_0924 0.29 +0.1
1,058,506 + Echvi_0924 0.31 -0.6
1,058,521 - Echvi_0924 0.32 +0.2
1,058,535 + Echvi_0924 0.33 -1.2
1,058,560 + Echvi_0924 0.35 +1.5
1,058,560 + Echvi_0924 0.35 -1.0
1,058,567 + Echvi_0924 0.36 -0.2
1,058,625 + Echvi_0924 0.41 +0.2
1,058,625 + Echvi_0924 0.41 -0.4
1,058,626 - Echvi_0924 0.41 -1.1
1,058,662 + Echvi_0924 0.44 -0.5
1,058,663 - Echvi_0924 0.44 -0.2
1,058,699 - Echvi_0924 0.48 +0.6
1,058,706 + Echvi_0924 0.48 -0.1
1,058,707 - Echvi_0924 0.48 -0.1
1,058,727 + Echvi_0924 0.50 +0.5
1,058,727 + Echvi_0924 0.50 +1.3
1,058,728 - Echvi_0924 0.50 -0.5
1,058,898 + Echvi_0924 0.65 -0.1
1,058,900 + Echvi_0924 0.65 -0.1
1,058,900 + Echvi_0924 0.65 +2.2
1,058,901 - Echvi_0924 0.65 -0.4
1,058,901 - Echvi_0924 0.65 -0.6
1,058,909 + Echvi_0924 0.66 +1.1
1,058,909 + Echvi_0924 0.66 -0.4
1,058,909 + Echvi_0924 0.66 -0.1
1,058,909 + Echvi_0924 0.66 -1.7
1,058,909 + Echvi_0924 0.66 +0.0
1,058,909 + Echvi_0924 0.66 -0.4
1,058,910 - Echvi_0924 0.66 +0.2
1,058,910 - Echvi_0924 0.66 -1.5
1,058,910 - Echvi_0924 0.66 -1.1
1,058,910 - Echvi_0924 0.66 -0.4
1,058,910 - Echvi_0924 0.66 -1.4
1,058,910 - Echvi_0924 0.66 -2.6
1,058,910 - Echvi_0924 0.66 +0.7
1,058,938 - Echvi_0924 0.68 +1.0
1,058,943 + Echvi_0924 0.69 -0.4

Or see this region's nucleotide sequence