Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0806 and Echvi_0807 are separated by 891 nucleotides Echvi_0807 and Echvi_0808 are separated by 348 nucleotides
Echvi_0806: Echvi_0806 - seryl-tRNA synthetase, at 918,035 to 919,315
_0806
Echvi_0807: Echvi_0807 - transcription termination factor Rho, at 920,207 to 921,988
_0807
Echvi_0808: Echvi_0808 - hypothetical protein, at 922,337 to 924,913
_0808
Position (kb) 920
921
922 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 919.349 kb on - strand at 919.425 kb on + strand at 919.505 kb on + strand at 919.505 kb on + strand at 919.505 kb on + strand at 919.506 kb on - strand at 919.506 kb on - strand at 919.524 kb on + strand at 919.525 kb on - strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.593 kb on - strand at 919.593 kb on - strand at 919.593 kb on - strand at 919.596 kb on + strand at 919.596 kb on + strand at 919.596 kb on + strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.644 kb on - strand at 919.733 kb on + strand at 919.770 kb on - strand at 919.792 kb on + strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.801 kb on + strand at 919.848 kb on - strand at 919.870 kb on - strand at 919.893 kb on - strand at 919.893 kb on - strand at 919.922 kb on - strand at 919.946 kb on + strand at 919.947 kb on - strand at 919.982 kb on + strand at 919.983 kb on - strand at 919.984 kb on + strand at 920.007 kb on - strand at 920.022 kb on - strand at 920.022 kb on - strand at 920.022 kb on - strand at 920.139 kb on - strand at 922.004 kb on + strand at 922.047 kb on + strand at 922.142 kb on + strand at 922.142 kb on + strand at 922.173 kb on + strand at 922.173 kb on + strand at 922.173 kb on + strand at 922.176 kb on + strand at 922.177 kb on - strand at 922.185 kb on + strand at 922.186 kb on - strand at 922.188 kb on + strand at 922.188 kb on + strand at 922.189 kb on - strand at 922.189 kb on - strand at 922.189 kb on - strand at 922.262 kb on + strand at 922.262 kb on + strand at 922.263 kb on - strand at 922.308 kb on - strand at 922.308 kb on - strand at 922.308 kb on - strand at 922.311 kb on + strand at 922.311 kb on + strand at 922.312 kb on - strand at 922.312 kb on - strand at 922.312 kb on - strand at 922.312 kb on - strand at 922.323 kb on + strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.329 kb on + strand at 922.330 kb on - strand at 922.330 kb on - strand at 922.386 kb on + strand at 922.507 kb on + strand at 922.508 kb on - strand at 922.508 kb on - strand at 922.508 kb on - strand at 922.536 kb on - strand at 922.565 kb on + strand at 922.566 kb on - strand at 922.566 kb on - strand at 922.586 kb on + strand at 922.587 kb on - strand at 922.592 kb on + strand at 922.593 kb on - strand at 922.593 kb on - strand at 922.639 kb on - strand, within Echvi_0808 at 922.639 kb on - strand, within Echvi_0808 at 922.639 kb on - strand, within Echvi_0808 at 922.639 kb on - strand, within Echvi_0808 at 922.658 kb on + strand, within Echvi_0808 at 922.659 kb on - strand, within Echvi_0808 at 922.659 kb on - strand, within Echvi_0808 at 922.660 kb on + strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.664 kb on + strand, within Echvi_0808 at 922.665 kb on - strand, within Echvi_0808 at 922.665 kb on - strand, within Echvi_0808 at 922.668 kb on - strand, within Echvi_0808 at 922.669 kb on + strand, within Echvi_0808 at 922.670 kb on - strand, within Echvi_0808 at 922.673 kb on + strand, within Echvi_0808 at 922.687 kb on + strand, within Echvi_0808 at 922.693 kb on - strand, within Echvi_0808 at 922.703 kb on + strand, within Echvi_0808 at 922.703 kb on + strand, within Echvi_0808 at 922.703 kb on + strand, within Echvi_0808 at 922.712 kb on - strand, within Echvi_0808 at 922.735 kb on + strand, within Echvi_0808 at 922.766 kb on + strand, within Echvi_0808 at 922.767 kb on - strand, within Echvi_0808 at 922.769 kb on + strand, within Echvi_0808 at 922.769 kb on + strand, within Echvi_0808 at 922.769 kb on + strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.795 kb on - strand, within Echvi_0808 at 922.797 kb on + strand, within Echvi_0808 at 922.797 kb on + strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.845 kb on + strand, within Echvi_0808 at 922.846 kb on - strand, within Echvi_0808 at 922.846 kb on - strand, within Echvi_0808 at 922.846 kb on - strand, within Echvi_0808 at 922.848 kb on + strand, within Echvi_0808 at 922.849 kb on - strand, within Echvi_0808 at 922.871 kb on + strand, within Echvi_0808 at 922.872 kb on - strand, within Echvi_0808 at 922.885 kb on + strand, within Echvi_0808 at 922.888 kb on + strand, within Echvi_0808 at 922.889 kb on - strand, within Echvi_0808 at 922.889 kb on - strand, within Echvi_0808 at 922.889 kb on - strand, within Echvi_0808
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 919,349 - +0.5 919,425 + +1.4 919,505 + +0.4 919,505 + +1.3 919,505 + +1.1 919,506 - -0.4 919,506 - -0.1 919,524 + +1.5 919,525 - +0.6 919,592 + +1.8 919,592 + +2.9 919,592 + +1.0 919,592 + -0.2 919,592 + +2.2 919,592 + +1.6 919,593 - +1.8 919,593 - +0.1 919,593 - -1.0 919,596 + +0.4 919,596 + +1.4 919,596 + +2.0 919,597 - +0.1 919,597 - +0.3 919,597 - -0.4 919,597 - -0.1 919,644 - -0.3 919,733 + +1.2 919,770 - -1.4 919,792 + +0.7 919,793 - -0.0 919,793 - -1.7 919,793 - +1.4 919,793 - -0.2 919,801 + +2.6 919,848 - +0.5 919,870 - +0.3 919,893 - -0.1 919,893 - +0.3 919,922 - -0.2 919,946 + +5.3 919,947 - +0.1 919,982 + +3.2 919,983 - +2.4 919,984 + +2.9 920,007 - -0.0 920,022 - -0.0 920,022 - -0.9 920,022 - -0.6 920,139 - +1.6 922,004 + -0.4 922,047 + -1.2 922,142 + -2.1 922,142 + +0.2 922,173 + +0.1 922,173 + +2.6 922,173 + -2.7 922,176 + +0.6 922,177 - +0.2 922,185 + -1.0 922,186 - -0.2 922,188 + +0.9 922,188 + -0.0 922,189 - -0.6 922,189 - -1.4 922,189 - +1.1 922,262 + +0.3 922,262 + +0.9 922,263 - +0.9 922,308 - +0.5 922,308 - -0.4 922,308 - -0.9 922,311 + +1.3 922,311 + +0.0 922,312 - -1.9 922,312 - -0.1 922,312 - -1.7 922,312 - +0.2 922,323 + -1.5 922,324 - +0.5 922,324 - +1.3 922,324 - +0.3 922,324 - +2.3 922,324 - -0.0 922,324 - -2.5 922,329 + -0.0 922,330 - +1.6 922,330 - +0.3 922,386 + -2.1 922,507 + +0.3 922,508 - -0.7 922,508 - +0.2 922,508 - +0.4 922,536 - +0.7 922,565 + +1.9 922,566 - +1.1 922,566 - -0.6 922,586 + -1.0 922,587 - +0.8 922,592 + +0.3 922,593 - -0.8 922,593 - +0.7 922,639 - Echvi_0808 0.12 +1.6 922,639 - Echvi_0808 0.12 +1.3 922,639 - Echvi_0808 0.12 +1.6 922,639 - Echvi_0808 0.12 +1.4 922,658 + Echvi_0808 0.12 -1.4 922,659 - Echvi_0808 0.12 -0.2 922,659 - Echvi_0808 0.12 -0.4 922,660 + Echvi_0808 0.13 -1.3 922,661 - Echvi_0808 0.13 +1.3 922,661 - Echvi_0808 0.13 +1.1 922,661 - Echvi_0808 0.13 -0.7 922,661 - Echvi_0808 0.13 -0.0 922,661 - +2.0 922,661 - Echvi_0808 0.13 -0.1 922,661 - Echvi_0808 0.13 +0.1 922,661 - Echvi_0808 0.13 -1.1 922,664 + Echvi_0808 0.13 +0.7 922,665 - Echvi_0808 0.13 +1.4 922,665 - Echvi_0808 0.13 +1.8 922,668 - Echvi_0808 0.13 +1.5 922,669 + Echvi_0808 0.13 +1.2 922,670 - Echvi_0808 0.13 +0.2 922,673 + Echvi_0808 0.13 +1.1 922,687 + Echvi_0808 0.14 +0.3 922,693 - Echvi_0808 0.14 +0.6 922,703 + Echvi_0808 0.14 -1.3 922,703 + Echvi_0808 0.14 +1.3 922,703 + Echvi_0808 0.14 -0.3 922,712 - Echvi_0808 0.15 -0.0 922,735 + Echvi_0808 0.15 +0.3 922,766 + Echvi_0808 0.17 +0.3 922,767 - Echvi_0808 0.17 +1.5 922,769 + Echvi_0808 0.17 -0.1 922,769 + Echvi_0808 0.17 -2.1 922,769 + Echvi_0808 0.17 +0.6 922,770 - Echvi_0808 0.17 -1.5 922,770 - Echvi_0808 0.17 +1.6 922,770 - Echvi_0808 0.17 +0.4 922,770 - Echvi_0808 0.17 +0.3 922,795 - Echvi_0808 0.18 -0.0 922,797 + Echvi_0808 0.18 -0.1 922,797 + Echvi_0808 0.18 -0.1 922,798 - Echvi_0808 0.18 -0.9 922,798 - Echvi_0808 0.18 +0.9 922,798 - Echvi_0808 0.18 +0.6 922,798 - Echvi_0808 0.18 +2.0 922,845 + Echvi_0808 0.20 -1.6 922,846 - Echvi_0808 0.20 +2.2 922,846 - Echvi_0808 0.20 -0.2 922,846 - Echvi_0808 0.20 +1.0 922,848 + Echvi_0808 0.20 +0.3 922,849 - Echvi_0808 0.20 -0.2 922,871 + Echvi_0808 0.21 -0.2 922,872 - Echvi_0808 0.21 +1.7 922,885 + Echvi_0808 0.21 +0.4 922,888 + Echvi_0808 0.21 -0.0 922,889 - Echvi_0808 0.21 +2.1 922,889 - Echvi_0808 0.21 +0.6 922,889 - Echvi_0808 0.21 -1.2
Or see this region's nucleotide sequence