Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0342 and Echvi_0343 are separated by 1 nucleotides Echvi_0343 and Echvi_0344 are separated by 65 nucleotides
Echvi_0342: Echvi_0342 - ATP-dependent DNA helicase, RecQ family, at 363,196 to 365,118
_0342
Echvi_0343: Echvi_0343 - Enoyl-CoA hydratase/carnithine racemase, at 365,120 to 365,896
_0343
Echvi_0344: Echvi_0344 - ComEC/Rec2-related protein, at 365,962 to 367,920
_0344
Position (kb) 365
366 Strain fitness (log2 ratio) -2
-1
0
1
2 at 365.121 kb on + strand at 365.121 kb on + strand at 365.122 kb on - strand at 365.211 kb on + strand, within Echvi_0343 at 365.211 kb on + strand, within Echvi_0343 at 365.211 kb on + strand, within Echvi_0343 at 365.299 kb on + strand, within Echvi_0343 at 365.369 kb on + strand, within Echvi_0343 at 365.370 kb on - strand, within Echvi_0343 at 365.611 kb on + strand, within Echvi_0343 at 365.612 kb on - strand, within Echvi_0343 at 365.612 kb on - strand, within Echvi_0343 at 365.612 kb on - strand, within Echvi_0343 at 365.613 kb on + strand, within Echvi_0343 at 365.613 kb on + strand, within Echvi_0343 at 365.614 kb on - strand, within Echvi_0343 at 365.614 kb on - strand, within Echvi_0343 at 365.614 kb on - strand, within Echvi_0343 at 365.672 kb on - strand, within Echvi_0343 at 365.854 kb on - strand at 365.913 kb on + strand at 365.914 kb on - strand at 365.914 kb on - strand at 365.923 kb on + strand at 365.980 kb on + strand at 366.048 kb on - strand at 366.066 kb on + strand at 366.126 kb on - strand at 366.181 kb on - strand, within Echvi_0344 at 366.213 kb on - strand, within Echvi_0344 at 366.213 kb on - strand, within Echvi_0344 at 366.272 kb on + strand, within Echvi_0344 at 366.272 kb on + strand, within Echvi_0344 at 366.273 kb on - strand, within Echvi_0344 at 366.273 kb on - strand, within Echvi_0344 at 366.300 kb on + strand, within Echvi_0344 at 366.300 kb on + strand, within Echvi_0344 at 366.301 kb on - strand, within Echvi_0344 at 366.302 kb on + strand, within Echvi_0344 at 366.302 kb on + strand, within Echvi_0344 at 366.302 kb on + strand, within Echvi_0344 at 366.303 kb on - strand, within Echvi_0344 at 366.303 kb on - strand, within Echvi_0344 at 366.309 kb on - strand, within Echvi_0344 at 366.310 kb on + strand, within Echvi_0344 at 366.310 kb on + strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.389 kb on + strand, within Echvi_0344 at 366.395 kb on + strand, within Echvi_0344 at 366.396 kb on - strand, within Echvi_0344 at 366.396 kb on - strand, within Echvi_0344 at 366.396 kb on - strand, within Echvi_0344 at 366.425 kb on + strand, within Echvi_0344 at 366.476 kb on + strand, within Echvi_0344 at 366.541 kb on + strand, within Echvi_0344 at 366.693 kb on - strand, within Echvi_0344 at 366.695 kb on + strand, within Echvi_0344 at 366.696 kb on - strand, within Echvi_0344 at 366.761 kb on + strand, within Echvi_0344 at 366.761 kb on + strand, within Echvi_0344 at 366.762 kb on - strand, within Echvi_0344 at 366.762 kb on - strand, within Echvi_0344 at 366.762 kb on - strand, within Echvi_0344 at 366.771 kb on + strand, within Echvi_0344 at 366.772 kb on - strand, within Echvi_0344 at 366.836 kb on + strand, within Echvi_0344 at 366.864 kb on + strand, within Echvi_0344 at 366.865 kb on - strand, within Echvi_0344 at 366.869 kb on + strand, within Echvi_0344 at 366.869 kb on + strand, within Echvi_0344 at 366.869 kb on + strand, within Echvi_0344 at 366.870 kb on - strand, within Echvi_0344
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 365,121 + -0.6 365,121 + -0.8 365,122 - -1.0 365,211 + Echvi_0343 0.12 +1.0 365,211 + Echvi_0343 0.12 -0.6 365,211 + Echvi_0343 0.12 -0.0 365,299 + Echvi_0343 0.23 -1.0 365,369 + Echvi_0343 0.32 -0.8 365,370 - Echvi_0343 0.32 +0.2 365,611 + Echvi_0343 0.63 -2.6 365,612 - Echvi_0343 0.63 -1.7 365,612 - Echvi_0343 0.63 -0.7 365,612 - Echvi_0343 0.63 -0.4 365,613 + Echvi_0343 0.63 -0.8 365,613 + Echvi_0343 0.63 -2.0 365,614 - Echvi_0343 0.64 +2.6 365,614 - Echvi_0343 0.64 +0.3 365,614 - Echvi_0343 0.64 -0.7 365,672 - Echvi_0343 0.71 -2.0 365,854 - -0.6 365,913 + -2.3 365,914 - -1.1 365,914 - +0.5 365,923 + -0.5 365,980 + +0.2 366,048 - -1.4 366,066 + -0.4 366,126 - +0.4 366,181 - Echvi_0344 0.11 -0.1 366,213 - Echvi_0344 0.13 -0.3 366,213 - Echvi_0344 0.13 +0.3 366,272 + Echvi_0344 0.16 -1.1 366,272 + Echvi_0344 0.16 -0.8 366,273 - Echvi_0344 0.16 +0.2 366,273 - Echvi_0344 0.16 -0.9 366,300 + Echvi_0344 0.17 -0.0 366,300 + Echvi_0344 0.17 -1.5 366,301 - Echvi_0344 0.17 +0.5 366,302 + Echvi_0344 0.17 +0.1 366,302 + Echvi_0344 0.17 -1.4 366,302 + Echvi_0344 0.17 -0.0 366,303 - Echvi_0344 0.17 +2.2 366,303 - Echvi_0344 0.17 +1.6 366,309 - Echvi_0344 0.18 -0.8 366,310 + Echvi_0344 0.18 +0.3 366,310 + Echvi_0344 0.18 +1.6 366,311 - Echvi_0344 0.18 +1.5 366,311 - Echvi_0344 0.18 +0.6 366,311 - Echvi_0344 0.18 -0.9 366,311 - Echvi_0344 0.18 +0.2 366,389 + Echvi_0344 0.22 -0.5 366,395 + Echvi_0344 0.22 +0.5 366,396 - Echvi_0344 0.22 +0.1 366,396 - Echvi_0344 0.22 +1.0 366,396 - Echvi_0344 0.22 -0.1 366,425 + Echvi_0344 0.24 -0.3 366,476 + Echvi_0344 0.26 +0.2 366,541 + Echvi_0344 0.30 +1.1 366,693 - Echvi_0344 0.37 +1.1 366,695 + Echvi_0344 0.37 +1.6 366,696 - Echvi_0344 0.37 -1.2 366,761 + Echvi_0344 0.41 +0.8 366,761 + Echvi_0344 0.41 +0.6 366,762 - Echvi_0344 0.41 +1.4 366,762 - Echvi_0344 0.41 -0.1 366,762 - Echvi_0344 0.41 -0.8 366,771 + Echvi_0344 0.41 -0.3 366,772 - Echvi_0344 0.41 +0.2 366,836 + Echvi_0344 0.45 -0.1 366,864 + Echvi_0344 0.46 -1.4 366,865 - Echvi_0344 0.46 -0.9 366,869 + Echvi_0344 0.46 +0.6 366,869 + Echvi_0344 0.46 -0.2 366,869 + Echvi_0344 0.46 +0.4 366,870 - Echvi_0344 0.46 -1.4
Or see this region's nucleotide sequence