Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0317 and Echvi_0318 overlap by 4 nucleotides Echvi_0318 and Echvi_0319 are separated by 455 nucleotides Echvi_0319 and Echvi_0320 are separated by 106 nucleotides
Echvi_0317: Echvi_0317 - S-adenosyl-methyltransferase MraW, at 330,667 to 331,575
_0317
Echvi_0318: Echvi_0318 - mraZ protein, at 331,572 to 332,024
_0318
Echvi_0319: Echvi_0319 - Geranylgeranyl pyrophosphate synthase, at 332,480 to 333,454
_0319
Echvi_0320: Echvi_0320 - Uncharacterized protein conserved in bacteria, at 333,561 to 334,484
_0320
Position (kb) 332
333
334 Strain fitness (log2 ratio) -2
-1
0
1
2 at 331.644 kb on - strand, within Echvi_0318 at 331.649 kb on - strand, within Echvi_0318 at 331.693 kb on - strand, within Echvi_0318 at 331.758 kb on - strand, within Echvi_0318 at 331.771 kb on - strand, within Echvi_0318 at 331.803 kb on - strand, within Echvi_0318 at 331.848 kb on - strand, within Echvi_0318 at 332.003 kb on - strand at 332.003 kb on - strand at 332.028 kb on - strand at 332.052 kb on - strand at 332.165 kb on + strand at 332.278 kb on + strand at 332.328 kb on + strand at 332.423 kb on + strand at 332.460 kb on - strand at 332.465 kb on - strand at 333.475 kb on - strand at 333.478 kb on - strand at 333.478 kb on - strand at 333.488 kb on - strand at 333.488 kb on - strand at 333.523 kb on + strand at 333.524 kb on - strand at 333.524 kb on - strand at 333.524 kb on - strand at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand at 333.737 kb on - strand, within Echvi_0320 at 333.737 kb on - strand, within Echvi_0320 at 333.737 kb on - strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.772 kb on + strand, within Echvi_0320 at 333.805 kb on + strand, within Echvi_0320 at 333.849 kb on - strand, within Echvi_0320 at 333.872 kb on + strand, within Echvi_0320 at 333.873 kb on - strand, within Echvi_0320 at 333.919 kb on + strand, within Echvi_0320 at 333.920 kb on - strand, within Echvi_0320 at 333.920 kb on - strand, within Echvi_0320 at 334.072 kb on + strand, within Echvi_0320 at 334.072 kb on + strand, within Echvi_0320 at 334.111 kb on - strand, within Echvi_0320 at 334.207 kb on + strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.302 kb on - strand, within Echvi_0320 at 334.302 kb on - strand, within Echvi_0320 at 334.302 kb on - strand, within Echvi_0320 at 334.303 kb on + strand, within Echvi_0320 at 334.303 kb on + strand, within Echvi_0320 at 334.307 kb on + strand, within Echvi_0320 at 334.327 kb on + strand, within Echvi_0320 at 334.328 kb on - strand, within Echvi_0320 at 334.328 kb on - strand, within Echvi_0320
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 331,644 - Echvi_0318 0.16 -0.7 331,649 - Echvi_0318 0.17 +0.3 331,693 - Echvi_0318 0.27 -1.0 331,758 - Echvi_0318 0.41 -1.4 331,771 - Echvi_0318 0.44 -1.1 331,803 - Echvi_0318 0.51 -1.5 331,848 - Echvi_0318 0.61 +0.6 332,003 - -1.2 332,003 - -0.9 332,028 - -1.2 332,052 - +1.2 332,165 + -0.4 332,278 + +1.0 332,328 + -0.1 332,423 + +0.3 332,460 - -1.5 332,465 - -0.8 333,475 - -0.2 333,478 - -1.9 333,478 - -0.3 333,488 - +0.8 333,488 - +0.2 333,523 + +1.5 333,524 - +0.8 333,524 - -0.5 333,524 - -0.5 333,736 + Echvi_0320 0.19 -0.4 333,736 + Echvi_0320 0.19 -1.4 333,736 + Echvi_0320 0.19 +1.4 333,736 + Echvi_0320 0.19 -0.5 333,736 + Echvi_0320 0.19 +0.8 333,736 + +2.5 333,737 - Echvi_0320 0.19 +0.2 333,737 - Echvi_0320 0.19 -1.8 333,737 - Echvi_0320 0.19 -0.2 333,761 + Echvi_0320 0.22 +0.5 333,761 + Echvi_0320 0.22 -1.1 333,761 + Echvi_0320 0.22 +0.0 333,761 + Echvi_0320 0.22 +0.3 333,772 + Echvi_0320 0.23 -0.6 333,805 + Echvi_0320 0.26 -1.0 333,849 - Echvi_0320 0.31 -1.1 333,872 + Echvi_0320 0.34 -0.6 333,873 - Echvi_0320 0.34 -0.2 333,919 + Echvi_0320 0.39 +0.3 333,920 - Echvi_0320 0.39 +0.4 333,920 - Echvi_0320 0.39 -1.7 334,072 + Echvi_0320 0.55 -0.4 334,072 + Echvi_0320 0.55 -0.3 334,111 - Echvi_0320 0.60 +0.5 334,207 + Echvi_0320 0.70 -1.2 334,295 - Echvi_0320 0.79 +1.4 334,295 - Echvi_0320 0.79 -1.0 334,295 - Echvi_0320 0.79 +0.1 334,295 - Echvi_0320 0.79 -0.3 334,302 - Echvi_0320 0.80 +1.0 334,302 - Echvi_0320 0.80 +1.4 334,302 - Echvi_0320 0.80 +0.0 334,303 + Echvi_0320 0.80 +0.8 334,303 + Echvi_0320 0.80 -0.0 334,307 + Echvi_0320 0.81 -1.2 334,327 + Echvi_0320 0.83 +0.8 334,328 - Echvi_0320 0.83 -2.3 334,328 - Echvi_0320 0.83 -1.0
Or see this region's nucleotide sequence