Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0071 and Echvi_0072 are separated by 208 nucleotides Echvi_0072 and Echvi_0073 are separated by 59 nucleotides
Echvi_0071: Echvi_0071 - RNA polymerase sigma-54 factor, at 71,686 to 73,137
_0071
Echvi_0072: Echvi_0072 - asparaginyl-tRNA synthetase, at 73,346 to 74,797
_0072
Echvi_0073: Echvi_0073 - yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region, at 74,857 to 76,368
_0073
Position (kb) 73
74
75 Strain fitness (log2 ratio) -2
-1
0
1
2 at 73.152 kb on + strand at 73.152 kb on + strand at 73.190 kb on + strand at 73.193 kb on + strand at 73.258 kb on + strand at 73.258 kb on + strand at 73.258 kb on + strand at 73.283 kb on + strand at 73.301 kb on + strand at 73.319 kb on + strand at 73.322 kb on + strand at 73.322 kb on + strand at 74.795 kb on + strand at 74.796 kb on - strand at 74.802 kb on + strand at 74.802 kb on + strand at 74.802 kb on + strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.805 kb on + strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.807 kb on + strand at 74.807 kb on + strand at 74.971 kb on + strand at 75.003 kb on - strand at 75.066 kb on + strand, within Echvi_0073 at 75.067 kb on - strand, within Echvi_0073 at 75.118 kb on - strand, within Echvi_0073 at 75.123 kb on + strand, within Echvi_0073 at 75.123 kb on + strand, within Echvi_0073 at 75.124 kb on - strand, within Echvi_0073 at 75.196 kb on - strand, within Echvi_0073 at 75.196 kb on - strand, within Echvi_0073 at 75.237 kb on + strand, within Echvi_0073 at 75.262 kb on - strand, within Echvi_0073 at 75.270 kb on - strand, within Echvi_0073 at 75.298 kb on + strand, within Echvi_0073 at 75.298 kb on + strand, within Echvi_0073 at 75.299 kb on - strand, within Echvi_0073 at 75.306 kb on + strand, within Echvi_0073 at 75.339 kb on - strand, within Echvi_0073 at 75.432 kb on + strand, within Echvi_0073 at 75.508 kb on + strand, within Echvi_0073 at 75.508 kb on + strand, within Echvi_0073 at 75.509 kb on - strand, within Echvi_0073 at 75.595 kb on + strand, within Echvi_0073 at 75.595 kb on + strand, within Echvi_0073 at 75.595 kb on + strand, within Echvi_0073 at 75.605 kb on + strand, within Echvi_0073 at 75.667 kb on - strand, within Echvi_0073 at 75.702 kb on - strand, within Echvi_0073 at 75.708 kb on + strand, within Echvi_0073 at 75.708 kb on + strand, within Echvi_0073 at 75.709 kb on - strand, within Echvi_0073 at 75.776 kb on + strand, within Echvi_0073
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 73,152 + -1.1 73,152 + -1.0 73,190 + -1.0 73,193 + -1.3 73,258 + +0.6 73,258 + -1.5 73,258 + -1.9 73,283 + -1.9 73,301 + -1.5 73,319 + +0.5 73,322 + +1.3 73,322 + -0.5 74,795 + -1.5 74,796 - +0.0 74,802 + +0.3 74,802 + -1.4 74,802 + -1.9 74,803 - -0.8 74,803 - -1.5 74,803 - -2.4 74,803 - +2.1 74,803 - -0.4 74,803 - +1.5 74,803 - -0.1 74,803 - -2.2 74,805 + +0.2 74,806 - -1.0 74,806 - +1.6 74,806 - +1.0 74,806 - -2.1 74,806 - -0.4 74,807 + +0.5 74,807 + -1.4 74,971 + -0.0 75,003 - +0.5 75,066 + Echvi_0073 0.14 +0.9 75,067 - Echvi_0073 0.14 -2.0 75,118 - Echvi_0073 0.17 -1.4 75,123 + Echvi_0073 0.18 -1.6 75,123 + Echvi_0073 0.18 +0.2 75,124 - Echvi_0073 0.18 +0.1 75,196 - Echvi_0073 0.22 +1.3 75,196 - Echvi_0073 0.22 +0.3 75,237 + Echvi_0073 0.25 -0.7 75,262 - Echvi_0073 0.27 +1.1 75,270 - Echvi_0073 0.27 -0.8 75,298 + Echvi_0073 0.29 +2.2 75,298 + Echvi_0073 0.29 -2.1 75,299 - Echvi_0073 0.29 +0.8 75,306 + Echvi_0073 0.30 -0.2 75,339 - Echvi_0073 0.32 -2.4 75,432 + Echvi_0073 0.38 -1.5 75,508 + Echvi_0073 0.43 +0.3 75,508 + Echvi_0073 0.43 -1.7 75,509 - Echvi_0073 0.43 +1.6 75,595 + Echvi_0073 0.49 +0.5 75,595 + Echvi_0073 0.49 +0.5 75,595 + Echvi_0073 0.49 +0.2 75,605 + Echvi_0073 0.49 -0.9 75,667 - Echvi_0073 0.54 -0.7 75,702 - Echvi_0073 0.56 -0.0 75,708 + Echvi_0073 0.56 -2.6 75,708 + Echvi_0073 0.56 -0.2 75,709 - Echvi_0073 0.56 -0.6 75,776 + Echvi_0073 0.61 -0.6
Or see this region's nucleotide sequence