Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20940 and CA264_20945 are separated by 330 nucleotides CA264_20945 and CA264_20950 are separated by 82 nucleotides CA264_20950 and CA264_20955 are separated by 455 nucleotides
CA264_20940: CA264_20940 - pyridine nucleotide-disulfide oxidoreductase, at 51,866 to 53,200
_20940
CA264_20945: CA264_20945 - hypothetical protein, at 53,531 to 53,812
_20945
CA264_20950: CA264_20950 - hypothetical protein, at 53,895 to 54,149
_20950
CA264_20955: CA264_20955 - hypothetical protein, at 54,605 to 55,042
_20955
Position (kb) 53
54
55 Strain fitness (log2 ratio) -1
0
1 at 52.900 kb on - strand, within CA264_20940 at 53.013 kb on - strand, within CA264_20940 at 53.114 kb on - strand at 53.185 kb on - strand at 53.190 kb on - strand at 53.190 kb on - strand at 53.199 kb on - strand at 53.233 kb on - strand at 53.247 kb on - strand at 53.251 kb on - strand at 53.281 kb on - strand at 53.281 kb on - strand at 53.326 kb on - strand at 53.369 kb on - strand at 53.400 kb on - strand at 53.546 kb on - strand at 53.546 kb on - strand at 53.566 kb on - strand, within CA264_20945 at 53.633 kb on - strand, within CA264_20945 at 53.633 kb on - strand, within CA264_20945 at 53.710 kb on - strand, within CA264_20945 at 53.845 kb on - strand at 53.845 kb on - strand at 53.868 kb on - strand at 53.903 kb on - strand at 53.903 kb on - strand at 53.916 kb on - strand at 53.995 kb on - strand, within CA264_20950 at 54.013 kb on - strand, within CA264_20950 at 54.054 kb on - strand, within CA264_20950 at 54.057 kb on - strand, within CA264_20950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 52,900 - CA264_20940 0.77 -0.5 53,013 - CA264_20940 0.86 +0.4 53,114 - +0.5 53,185 - -0.1 53,190 - -0.2 53,190 - +0.7 53,199 - -0.8 53,233 - -1.2 53,247 - +0.1 53,251 - +1.3 53,281 - -0.6 53,281 - -0.5 53,326 - +0.2 53,369 - -0.1 53,400 - +0.1 53,546 - -1.0 53,546 - -0.5 53,566 - CA264_20945 0.12 +0.8 53,633 - CA264_20945 0.36 -0.6 53,633 - CA264_20945 0.36 +0.4 53,710 - CA264_20945 0.63 +0.8 53,845 - +0.4 53,845 - -0.1 53,868 - -1.1 53,903 - -0.5 53,903 - +0.5 53,916 - -0.4 53,995 - CA264_20950 0.39 -0.8 54,013 - CA264_20950 0.46 -1.1 54,054 - CA264_20950 0.62 -0.7 54,057 - CA264_20950 0.64 +0.5
Or see this region's nucleotide sequence