Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18295 and CA264_18300 are separated by 235 nucleotides CA264_18300 and CA264_18305 are separated by 108 nucleotides CA264_18305 and CA264_18310 are separated by 307 nucleotides
CA264_18295: CA264_18295 - iron-sulfur cluster-binding protein, at 4,254,173 to 4,255,546
_18295
CA264_18300: CA264_18300 - peptidase M28, at 4,255,782 to 4,257,338
_18300
CA264_18305: CA264_18305 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 4,257,447 to 4,257,932
_18305
CA264_18310: CA264_18310 - hypothetical protein, at 4,258,240 to 4,258,374
_18310
Position (kb)
4255
4256
4257
4258 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4254.868 kb on + strand, within CA264_18295 at 4254.869 kb on - strand, within CA264_18295 at 4254.970 kb on - strand, within CA264_18295 at 4255.094 kb on + strand, within CA264_18295 at 4255.095 kb on - strand, within CA264_18295 at 4255.095 kb on - strand, within CA264_18295 at 4255.134 kb on + strand, within CA264_18295 at 4255.134 kb on + strand, within CA264_18295 at 4255.304 kb on + strand, within CA264_18295 at 4255.304 kb on + strand, within CA264_18295 at 4255.351 kb on - strand, within CA264_18295 at 4255.456 kb on - strand at 4255.456 kb on - strand at 4255.456 kb on - strand at 4255.535 kb on + strand at 4255.536 kb on - strand at 4255.541 kb on - strand at 4255.650 kb on - strand at 4255.661 kb on + strand at 4255.661 kb on + strand at 4255.695 kb on + strand at 4255.698 kb on + strand at 4255.710 kb on + strand at 4255.711 kb on - strand at 4255.760 kb on + strand at 4255.760 kb on + strand at 4255.776 kb on - strand at 4255.776 kb on - strand at 4255.791 kb on - strand at 4255.940 kb on - strand, within CA264_18300 at 4256.023 kb on + strand, within CA264_18300 at 4256.023 kb on + strand, within CA264_18300 at 4256.023 kb on + strand, within CA264_18300 at 4256.024 kb on - strand at 4256.024 kb on - strand, within CA264_18300 at 4256.024 kb on - strand, within CA264_18300 at 4256.024 kb on - strand, within CA264_18300 at 4256.027 kb on + strand, within CA264_18300 at 4256.027 kb on + strand, within CA264_18300 at 4256.027 kb on + strand, within CA264_18300 at 4256.029 kb on + strand, within CA264_18300 at 4256.029 kb on + strand, within CA264_18300 at 4256.050 kb on + strand, within CA264_18300 at 4256.117 kb on - strand, within CA264_18300 at 4256.117 kb on - strand, within CA264_18300 at 4256.122 kb on + strand, within CA264_18300 at 4256.122 kb on + strand, within CA264_18300 at 4256.122 kb on + strand, within CA264_18300 at 4256.122 kb on + strand, within CA264_18300 at 4256.123 kb on - strand, within CA264_18300 at 4256.123 kb on - strand, within CA264_18300 at 4256.123 kb on - strand, within CA264_18300 at 4256.123 kb on - strand, within CA264_18300 at 4256.152 kb on + strand, within CA264_18300 at 4256.230 kb on + strand, within CA264_18300 at 4256.231 kb on - strand, within CA264_18300 at 4256.231 kb on - strand, within CA264_18300 at 4256.281 kb on - strand, within CA264_18300 at 4256.281 kb on - strand, within CA264_18300 at 4256.385 kb on + strand, within CA264_18300 at 4256.428 kb on + strand, within CA264_18300 at 4256.429 kb on - strand, within CA264_18300 at 4256.479 kb on + strand, within CA264_18300 at 4256.655 kb on + strand, within CA264_18300 at 4256.755 kb on + strand, within CA264_18300 at 4256.755 kb on + strand, within CA264_18300 at 4256.756 kb on - strand, within CA264_18300 at 4256.756 kb on - strand, within CA264_18300 at 4256.844 kb on + strand, within CA264_18300 at 4256.862 kb on + strand, within CA264_18300 at 4256.863 kb on - strand, within CA264_18300 at 4256.877 kb on + strand, within CA264_18300 at 4256.878 kb on - strand, within CA264_18300 at 4256.899 kb on + strand, within CA264_18300 at 4256.900 kb on - strand, within CA264_18300 at 4256.901 kb on + strand, within CA264_18300 at 4256.902 kb on - strand, within CA264_18300 at 4257.140 kb on + strand, within CA264_18300 at 4257.141 kb on - strand, within CA264_18300 at 4257.143 kb on + strand, within CA264_18300 at 4257.143 kb on + strand, within CA264_18300 at 4257.143 kb on + strand, within CA264_18300 at 4257.171 kb on - strand, within CA264_18300 at 4257.330 kb on - strand at 4257.338 kb on + strand at 4257.338 kb on + strand at 4257.339 kb on - strand at 4257.391 kb on - strand at 4257.445 kb on + strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.945 kb on - strand at 4257.945 kb on - strand at 4257.945 kb on - strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.955 kb on + strand at 4257.955 kb on + strand at 4257.955 kb on + strand at 4257.958 kb on + strand at 4257.992 kb on + strand at 4257.992 kb on + strand at 4257.993 kb on - strand at 4257.993 kb on - strand at 4257.996 kb on + strand at 4257.997 kb on - strand at 4258.008 kb on - strand at 4258.019 kb on + strand at 4258.019 kb on + strand at 4258.019 kb on + strand at 4258.020 kb on - strand at 4258.043 kb on + strand at 4258.062 kb on - strand at 4258.066 kb on + strand at 4258.151 kb on - strand at 4258.173 kb on + strand at 4258.235 kb on + strand at 4258.235 kb on + strand at 4258.236 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 4,254,868 + CA264_18295 0.51 -0.1 4,254,869 - CA264_18295 0.51 -0.8 4,254,970 - CA264_18295 0.58 +0.5 4,255,094 + CA264_18295 0.67 -1.2 4,255,095 - CA264_18295 0.67 +0.2 4,255,095 - CA264_18295 0.67 -1.4 4,255,134 + CA264_18295 0.70 -0.1 4,255,134 + CA264_18295 0.70 -1.2 4,255,304 + CA264_18295 0.82 -1.2 4,255,304 + CA264_18295 0.82 -0.2 4,255,351 - CA264_18295 0.86 -1.3 4,255,456 - -1.2 4,255,456 - -1.9 4,255,456 - -1.0 4,255,535 + -0.7 4,255,536 - -1.5 4,255,541 - -1.9 4,255,650 - +0.7 4,255,661 + +0.7 4,255,661 + -1.5 4,255,695 + +0.1 4,255,698 + -0.4 4,255,710 + -0.3 4,255,711 - +0.1 4,255,760 + +0.4 4,255,760 + +0.7 4,255,776 - +0.5 4,255,776 - +0.7 4,255,791 - -0.1 4,255,940 - CA264_18300 0.10 +0.0 4,256,023 + CA264_18300 0.15 -0.8 4,256,023 + CA264_18300 0.15 -1.5 4,256,023 + CA264_18300 0.15 -0.1 4,256,024 - -0.5 4,256,024 - CA264_18300 0.16 -0.8 4,256,024 - CA264_18300 0.16 -0.5 4,256,024 - CA264_18300 0.16 +0.5 4,256,027 + CA264_18300 0.16 -0.7 4,256,027 + CA264_18300 0.16 -0.6 4,256,027 + CA264_18300 0.16 -0.2 4,256,029 + CA264_18300 0.16 -0.1 4,256,029 + CA264_18300 0.16 +0.7 4,256,050 + CA264_18300 0.17 -0.3 4,256,117 - CA264_18300 0.22 +0.1 4,256,117 - CA264_18300 0.22 -0.1 4,256,122 + CA264_18300 0.22 -0.3 4,256,122 + CA264_18300 0.22 -0.4 4,256,122 + CA264_18300 0.22 -1.1 4,256,122 + CA264_18300 0.22 -0.3 4,256,123 - CA264_18300 0.22 -1.5 4,256,123 - CA264_18300 0.22 -0.3 4,256,123 - CA264_18300 0.22 +1.1 4,256,123 - CA264_18300 0.22 +0.1 4,256,152 + CA264_18300 0.24 +0.5 4,256,230 + CA264_18300 0.29 +1.9 4,256,231 - CA264_18300 0.29 -0.2 4,256,231 - CA264_18300 0.29 -1.0 4,256,281 - CA264_18300 0.32 -1.3 4,256,281 - CA264_18300 0.32 +0.5 4,256,385 + CA264_18300 0.39 -0.5 4,256,428 + CA264_18300 0.41 -0.0 4,256,429 - CA264_18300 0.42 -0.1 4,256,479 + CA264_18300 0.45 +0.0 4,256,655 + CA264_18300 0.56 -1.0 4,256,755 + CA264_18300 0.62 -1.6 4,256,755 + CA264_18300 0.62 -0.3 4,256,756 - CA264_18300 0.63 +1.5 4,256,756 - CA264_18300 0.63 -0.4 4,256,844 + CA264_18300 0.68 -0.1 4,256,862 + CA264_18300 0.69 -0.6 4,256,863 - CA264_18300 0.69 +0.9 4,256,877 + CA264_18300 0.70 +0.1 4,256,878 - CA264_18300 0.70 -0.3 4,256,899 + CA264_18300 0.72 -0.3 4,256,900 - CA264_18300 0.72 -0.5 4,256,901 + CA264_18300 0.72 -0.7 4,256,902 - CA264_18300 0.72 +0.0 4,257,140 + CA264_18300 0.87 -0.3 4,257,141 - CA264_18300 0.87 +0.8 4,257,143 + CA264_18300 0.87 -0.7 4,257,143 + CA264_18300 0.87 -0.1 4,257,143 + CA264_18300 0.87 -0.2 4,257,171 - CA264_18300 0.89 -0.3 4,257,330 - +0.4 4,257,338 + +0.7 4,257,338 + -1.3 4,257,339 - -0.8 4,257,391 - -0.1 4,257,445 + -3.1 4,257,449 - -0.1 4,257,449 - -0.3 4,257,449 - -0.3 4,257,449 - -2.1 4,257,945 - -1.9 4,257,945 - -1.7 4,257,945 - -0.7 4,257,948 + +0.3 4,257,948 + -1.7 4,257,948 + +0.3 4,257,948 + -0.1 4,257,948 + +0.0 4,257,949 - +0.0 4,257,949 - -1.2 4,257,949 - -0.2 4,257,949 - -0.1 4,257,949 - -0.4 4,257,955 + +0.7 4,257,955 + -0.2 4,257,955 + +1.0 4,257,958 + -0.2 4,257,992 + -0.2 4,257,992 + -0.7 4,257,993 - -2.4 4,257,993 - -0.1 4,257,996 + -1.0 4,257,997 - -1.5 4,258,008 - -0.8 4,258,019 + -0.2 4,258,019 + -1.1 4,258,019 + +0.3 4,258,020 - -0.5 4,258,043 + -0.2 4,258,062 - -0.4 4,258,066 + +1.2 4,258,151 - +0.0 4,258,173 + +1.3 4,258,235 + +0.6 4,258,235 + -0.6 4,258,236 - -0.5
Or see this region's nucleotide sequence