Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15595 and CA264_15600 are separated by 221 nucleotides CA264_15600 and CA264_15605 are separated by 34 nucleotides CA264_15605 and CA264_15610 are separated by 242 nucleotides
CA264_15595: CA264_15595 - hypothetical protein, at 3,646,852 to 3,647,805
_15595
CA264_15600: CA264_15600 - tRNA glutamyl-Q synthetase, at 3,648,027 to 3,648,974
_15600
CA264_15605: CA264_15605 - hypothetical protein, at 3,649,009 to 3,649,539
_15605
CA264_15610: CA264_15610 - mechanosensitive ion channel protein MscS, at 3,649,782 to 3,651,149
_15610
Position (kb)
3648
3649 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3647.044 kb on - strand, within CA264_15595 at 3647.141 kb on + strand, within CA264_15595 at 3647.141 kb on + strand, within CA264_15595 at 3647.142 kb on - strand, within CA264_15595 at 3647.142 kb on - strand, within CA264_15595 at 3647.245 kb on - strand, within CA264_15595 at 3647.266 kb on + strand, within CA264_15595 at 3647.267 kb on - strand, within CA264_15595 at 3647.267 kb on - strand, within CA264_15595 at 3647.267 kb on - strand, within CA264_15595 at 3647.284 kb on - strand, within CA264_15595 at 3647.303 kb on + strand, within CA264_15595 at 3647.356 kb on + strand, within CA264_15595 at 3647.356 kb on + strand, within CA264_15595 at 3647.356 kb on + strand, within CA264_15595 at 3647.357 kb on - strand, within CA264_15595 at 3647.357 kb on - strand, within CA264_15595 at 3647.357 kb on - strand, within CA264_15595 at 3647.358 kb on + strand, within CA264_15595 at 3647.358 kb on + strand, within CA264_15595 at 3647.359 kb on - strand, within CA264_15595 at 3647.359 kb on - strand, within CA264_15595 at 3647.387 kb on + strand, within CA264_15595 at 3647.388 kb on - strand, within CA264_15595 at 3647.430 kb on + strand, within CA264_15595 at 3647.514 kb on + strand, within CA264_15595 at 3647.612 kb on + strand, within CA264_15595 at 3647.613 kb on - strand, within CA264_15595 at 3647.617 kb on + strand, within CA264_15595 at 3647.650 kb on - strand, within CA264_15595 at 3647.674 kb on + strand, within CA264_15595 at 3647.680 kb on + strand, within CA264_15595 at 3647.689 kb on - strand, within CA264_15595 at 3647.714 kb on + strand at 3647.715 kb on - strand at 3647.735 kb on + strand at 3647.742 kb on + strand at 3647.745 kb on - strand at 3647.760 kb on + strand at 3647.761 kb on - strand at 3647.826 kb on + strand at 3647.849 kb on + strand at 3647.862 kb on + strand at 3647.863 kb on - strand at 3647.948 kb on + strand at 3647.974 kb on - strand at 3647.987 kb on - strand at 3647.998 kb on + strand at 3648.026 kb on + strand at 3648.026 kb on + strand at 3648.027 kb on - strand at 3648.027 kb on - strand at 3648.156 kb on - strand, within CA264_15600 at 3648.158 kb on - strand, within CA264_15600 at 3648.158 kb on - strand, within CA264_15600 at 3648.288 kb on + strand, within CA264_15600 at 3648.315 kb on + strand, within CA264_15600 at 3648.357 kb on + strand, within CA264_15600 at 3648.357 kb on + strand, within CA264_15600 at 3648.497 kb on + strand, within CA264_15600 at 3648.498 kb on - strand, within CA264_15600 at 3648.583 kb on + strand, within CA264_15600 at 3648.591 kb on + strand, within CA264_15600 at 3648.777 kb on - strand, within CA264_15600 at 3648.799 kb on + strand, within CA264_15600 at 3648.825 kb on - strand, within CA264_15600 at 3648.972 kb on + strand at 3649.010 kb on + strand at 3649.010 kb on + strand at 3649.010 kb on + strand at 3649.010 kb on + strand at 3649.024 kb on + strand at 3649.024 kb on + strand at 3649.025 kb on - strand at 3649.025 kb on - strand at 3649.025 kb on - strand at 3649.086 kb on - strand, within CA264_15605 at 3649.160 kb on + strand, within CA264_15605 at 3649.161 kb on - strand, within CA264_15605 at 3649.183 kb on + strand, within CA264_15605 at 3649.183 kb on + strand, within CA264_15605 at 3649.184 kb on - strand, within CA264_15605 at 3649.243 kb on - strand, within CA264_15605 at 3649.268 kb on - strand, within CA264_15605 at 3649.324 kb on + strand, within CA264_15605 at 3649.325 kb on - strand, within CA264_15605 at 3649.325 kb on - strand, within CA264_15605 at 3649.325 kb on - strand, within CA264_15605 at 3649.390 kb on + strand, within CA264_15605 at 3649.401 kb on + strand, within CA264_15605 at 3649.402 kb on - strand, within CA264_15605 at 3649.564 kb on + strand at 3649.756 kb on + strand at 3649.756 kb on + strand at 3649.781 kb on + strand at 3649.781 kb on + strand at 3649.793 kb on + strand at 3649.851 kb on + strand at 3649.871 kb on + strand at 3649.909 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 3,647,044 - CA264_15595 0.20 +0.9 3,647,141 + CA264_15595 0.30 +0.1 3,647,141 + CA264_15595 0.30 +1.1 3,647,142 - CA264_15595 0.30 +1.4 3,647,142 - CA264_15595 0.30 +0.3 3,647,245 - CA264_15595 0.41 +0.7 3,647,266 + CA264_15595 0.43 -0.6 3,647,267 - CA264_15595 0.44 +0.9 3,647,267 - CA264_15595 0.44 +0.9 3,647,267 - CA264_15595 0.44 -0.4 3,647,284 - CA264_15595 0.45 +0.6 3,647,303 + CA264_15595 0.47 +0.4 3,647,356 + CA264_15595 0.53 +0.5 3,647,356 + CA264_15595 0.53 +0.5 3,647,356 + CA264_15595 0.53 -0.2 3,647,357 - CA264_15595 0.53 +0.1 3,647,357 - CA264_15595 0.53 +0.3 3,647,357 - CA264_15595 0.53 +0.8 3,647,358 + CA264_15595 0.53 +0.3 3,647,358 + CA264_15595 0.53 +0.3 3,647,359 - CA264_15595 0.53 -1.5 3,647,359 - CA264_15595 0.53 +0.0 3,647,387 + CA264_15595 0.56 -0.1 3,647,388 - CA264_15595 0.56 +0.6 3,647,430 + CA264_15595 0.61 +0.3 3,647,514 + CA264_15595 0.69 +0.8 3,647,612 + CA264_15595 0.80 -1.2 3,647,613 - CA264_15595 0.80 +1.3 3,647,617 + CA264_15595 0.80 +0.7 3,647,650 - CA264_15595 0.84 +1.3 3,647,674 + CA264_15595 0.86 +0.4 3,647,680 + CA264_15595 0.87 +0.5 3,647,689 - CA264_15595 0.88 +0.0 3,647,714 + +1.0 3,647,715 - +1.5 3,647,735 + +2.5 3,647,742 + +0.2 3,647,745 - +0.9 3,647,760 + +0.7 3,647,761 - +2.1 3,647,826 + +0.6 3,647,849 + -0.2 3,647,862 + -1.4 3,647,863 - -0.4 3,647,948 + -1.5 3,647,974 - -1.2 3,647,987 - -1.0 3,647,998 + +0.1 3,648,026 + -1.6 3,648,026 + -0.9 3,648,027 - -1.2 3,648,027 - +0.5 3,648,156 - CA264_15600 0.14 -2.1 3,648,158 - CA264_15600 0.14 +0.1 3,648,158 - CA264_15600 0.14 -0.5 3,648,288 + CA264_15600 0.28 +1.0 3,648,315 + CA264_15600 0.30 -1.6 3,648,357 + CA264_15600 0.35 +0.4 3,648,357 + CA264_15600 0.35 -1.1 3,648,497 + CA264_15600 0.50 -0.1 3,648,498 - CA264_15600 0.50 -1.1 3,648,583 + CA264_15600 0.59 +1.4 3,648,591 + CA264_15600 0.59 -1.1 3,648,777 - CA264_15600 0.79 +0.1 3,648,799 + CA264_15600 0.81 -0.6 3,648,825 - CA264_15600 0.84 -1.2 3,648,972 + -0.4 3,649,010 + -1.5 3,649,010 + -0.6 3,649,010 + +0.5 3,649,010 + -0.6 3,649,024 + -0.2 3,649,024 + -0.7 3,649,025 - +0.2 3,649,025 - -0.9 3,649,025 - +0.4 3,649,086 - CA264_15605 0.15 -0.7 3,649,160 + CA264_15605 0.28 +0.6 3,649,161 - CA264_15605 0.29 -0.4 3,649,183 + CA264_15605 0.33 +0.4 3,649,183 + CA264_15605 0.33 -0.4 3,649,184 - CA264_15605 0.33 -0.4 3,649,243 - CA264_15605 0.44 +0.3 3,649,268 - CA264_15605 0.49 -1.0 3,649,324 + CA264_15605 0.59 -0.5 3,649,325 - CA264_15605 0.60 +1.4 3,649,325 - CA264_15605 0.60 -0.5 3,649,325 - CA264_15605 0.60 -0.2 3,649,390 + CA264_15605 0.72 -0.6 3,649,401 + CA264_15605 0.74 +0.0 3,649,402 - CA264_15605 0.74 -0.8 3,649,564 + -1.5 3,649,756 + -0.5 3,649,756 + -0.9 3,649,781 + -0.5 3,649,781 + -0.8 3,649,793 + -0.7 3,649,851 + -2.5 3,649,871 + -0.4 3,649,909 + -0.7
Or see this region's nucleotide sequence