Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14040 and CA264_14045 are separated by 147 nucleotides
CA264_14040: CA264_14040 - peptidase S41, at 3,287,985 to 3,289,433
_14040
CA264_14045: CA264_14045 - hypothetical protein, at 3,289,581 to 3,290,990
_14045
Position (kb)
3287
3288
3289
3290 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3287.084 kb on - strand at 3287.101 kb on + strand at 3287.101 kb on + strand at 3287.105 kb on + strand at 3287.105 kb on + strand at 3287.106 kb on - strand at 3287.106 kb on - strand at 3287.108 kb on - strand at 3287.108 kb on - strand at 3287.163 kb on + strand at 3287.207 kb on + strand at 3287.208 kb on - strand at 3287.218 kb on + strand at 3287.273 kb on - strand at 3287.354 kb on + strand at 3287.355 kb on - strand at 3287.355 kb on - strand at 3287.355 kb on - strand at 3287.364 kb on - strand at 3287.364 kb on - strand at 3287.817 kb on + strand at 3287.845 kb on + strand at 3287.987 kb on - strand at 3288.026 kb on + strand at 3288.052 kb on + strand at 3288.121 kb on + strand at 3288.122 kb on - strand at 3288.126 kb on + strand at 3288.161 kb on - strand, within CA264_14040 at 3288.161 kb on - strand, within CA264_14040 at 3288.172 kb on - strand, within CA264_14040 at 3288.174 kb on - strand, within CA264_14040 at 3288.174 kb on - strand, within CA264_14040 at 3288.177 kb on + strand, within CA264_14040 at 3288.177 kb on + strand, within CA264_14040 at 3288.178 kb on - strand, within CA264_14040 at 3288.178 kb on - strand, within CA264_14040 at 3288.272 kb on + strand, within CA264_14040 at 3288.333 kb on + strand, within CA264_14040 at 3288.334 kb on - strand, within CA264_14040 at 3288.385 kb on + strand, within CA264_14040 at 3288.407 kb on + strand, within CA264_14040 at 3288.427 kb on + strand, within CA264_14040 at 3288.427 kb on + strand, within CA264_14040 at 3288.428 kb on - strand, within CA264_14040 at 3288.428 kb on - strand, within CA264_14040 at 3288.432 kb on - strand, within CA264_14040 at 3288.465 kb on - strand, within CA264_14040 at 3288.469 kb on - strand, within CA264_14040 at 3288.469 kb on - strand, within CA264_14040 at 3288.512 kb on + strand, within CA264_14040 at 3288.515 kb on + strand, within CA264_14040 at 3288.515 kb on + strand, within CA264_14040 at 3288.516 kb on - strand, within CA264_14040 at 3288.603 kb on + strand, within CA264_14040 at 3288.674 kb on + strand, within CA264_14040 at 3288.674 kb on + strand, within CA264_14040 at 3288.680 kb on - strand, within CA264_14040 at 3288.727 kb on - strand, within CA264_14040 at 3288.956 kb on + strand, within CA264_14040 at 3288.967 kb on + strand, within CA264_14040 at 3289.000 kb on + strand, within CA264_14040 at 3289.000 kb on + strand, within CA264_14040 at 3289.018 kb on - strand, within CA264_14040 at 3289.018 kb on - strand, within CA264_14040 at 3289.054 kb on + strand, within CA264_14040 at 3289.078 kb on - strand, within CA264_14040 at 3289.078 kb on - strand, within CA264_14040 at 3289.097 kb on + strand, within CA264_14040 at 3289.161 kb on - strand, within CA264_14040 at 3289.192 kb on + strand, within CA264_14040 at 3289.192 kb on + strand, within CA264_14040 at 3289.193 kb on - strand, within CA264_14040 at 3289.195 kb on - strand, within CA264_14040 at 3289.199 kb on + strand, within CA264_14040 at 3289.234 kb on - strand, within CA264_14040 at 3289.256 kb on + strand, within CA264_14040 at 3289.349 kb on + strand at 3289.349 kb on + strand at 3289.401 kb on + strand at 3289.402 kb on - strand at 3289.402 kb on - strand at 3289.493 kb on - strand at 3289.493 kb on - strand at 3289.507 kb on - strand at 3289.521 kb on + strand at 3289.522 kb on - strand at 3289.553 kb on - strand at 3289.582 kb on + strand at 3289.583 kb on - strand at 3289.584 kb on + strand at 3289.627 kb on + strand at 3289.628 kb on - strand at 3289.664 kb on - strand at 3289.775 kb on + strand, within CA264_14045 at 3289.776 kb on - strand, within CA264_14045 at 3289.786 kb on + strand, within CA264_14045 at 3289.813 kb on + strand, within CA264_14045 at 3289.814 kb on - strand, within CA264_14045 at 3289.831 kb on + strand, within CA264_14045 at 3289.832 kb on - strand, within CA264_14045 at 3289.844 kb on - strand, within CA264_14045 at 3289.860 kb on + strand, within CA264_14045 at 3289.860 kb on + strand, within CA264_14045 at 3289.915 kb on + strand, within CA264_14045 at 3290.001 kb on - strand, within CA264_14045 at 3290.002 kb on + strand, within CA264_14045 at 3290.002 kb on + strand, within CA264_14045 at 3290.006 kb on + strand, within CA264_14045 at 3290.007 kb on - strand, within CA264_14045 at 3290.057 kb on + strand, within CA264_14045 at 3290.092 kb on - strand, within CA264_14045 at 3290.108 kb on + strand, within CA264_14045 at 3290.109 kb on - strand, within CA264_14045 at 3290.117 kb on - strand, within CA264_14045 at 3290.135 kb on + strand, within CA264_14045 at 3290.189 kb on - strand, within CA264_14045 at 3290.207 kb on + strand, within CA264_14045 at 3290.210 kb on - strand, within CA264_14045 at 3290.212 kb on + strand, within CA264_14045 at 3290.286 kb on + strand, within CA264_14045 at 3290.286 kb on + strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.287 kb on - strand, within CA264_14045 at 3290.395 kb on + strand, within CA264_14045 at 3290.398 kb on + strand, within CA264_14045 at 3290.399 kb on - strand, within CA264_14045 at 3290.408 kb on - strand, within CA264_14045
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 3,287,084 - +0.5 3,287,101 + -0.4 3,287,101 + +0.3 3,287,105 + -0.4 3,287,105 + +0.4 3,287,106 - +0.3 3,287,106 - -1.2 3,287,108 - +1.0 3,287,108 - -1.1 3,287,163 + +0.0 3,287,207 + -0.2 3,287,208 - -0.1 3,287,218 + +0.1 3,287,273 - +0.1 3,287,354 + -0.0 3,287,355 - +0.7 3,287,355 - +0.8 3,287,355 - -0.1 3,287,364 - -0.3 3,287,364 - -1.6 3,287,817 + +1.8 3,287,845 + +0.6 3,287,987 - -0.0 3,288,026 + +0.3 3,288,052 + -0.6 3,288,121 + +0.9 3,288,122 - +0.4 3,288,126 + +0.1 3,288,161 - CA264_14040 0.12 +0.4 3,288,161 - CA264_14040 0.12 -0.4 3,288,172 - CA264_14040 0.13 +0.1 3,288,174 - CA264_14040 0.13 -0.3 3,288,174 - CA264_14040 0.13 -0.2 3,288,177 + CA264_14040 0.13 -0.2 3,288,177 + CA264_14040 0.13 -0.0 3,288,178 - CA264_14040 0.13 +0.2 3,288,178 - CA264_14040 0.13 +0.1 3,288,272 + CA264_14040 0.20 -0.2 3,288,333 + CA264_14040 0.24 +0.0 3,288,334 - CA264_14040 0.24 +1.2 3,288,385 + CA264_14040 0.28 -1.4 3,288,407 + CA264_14040 0.29 -0.1 3,288,427 + CA264_14040 0.31 -0.4 3,288,427 + CA264_14040 0.31 -0.3 3,288,428 - CA264_14040 0.31 -0.5 3,288,428 - CA264_14040 0.31 -0.3 3,288,432 - CA264_14040 0.31 -0.3 3,288,465 - CA264_14040 0.33 -0.1 3,288,469 - CA264_14040 0.33 -0.1 3,288,469 - CA264_14040 0.33 -0.2 3,288,512 + CA264_14040 0.36 -0.2 3,288,515 + CA264_14040 0.37 -0.4 3,288,515 + CA264_14040 0.37 +1.8 3,288,516 - CA264_14040 0.37 +0.8 3,288,603 + CA264_14040 0.43 -0.1 3,288,674 + CA264_14040 0.48 -0.3 3,288,674 + CA264_14040 0.48 +0.9 3,288,680 - CA264_14040 0.48 -0.8 3,288,727 - CA264_14040 0.51 +1.0 3,288,956 + CA264_14040 0.67 -0.1 3,288,967 + CA264_14040 0.68 -0.6 3,289,000 + CA264_14040 0.70 +0.1 3,289,000 + CA264_14040 0.70 -0.5 3,289,018 - CA264_14040 0.71 +0.5 3,289,018 - CA264_14040 0.71 -0.3 3,289,054 + CA264_14040 0.74 +0.0 3,289,078 - CA264_14040 0.75 -0.3 3,289,078 - CA264_14040 0.75 +0.3 3,289,097 + CA264_14040 0.77 +1.0 3,289,161 - CA264_14040 0.81 -0.1 3,289,192 + CA264_14040 0.83 +0.0 3,289,192 + CA264_14040 0.83 +1.5 3,289,193 - CA264_14040 0.83 -1.1 3,289,195 - CA264_14040 0.84 +3.6 3,289,199 + CA264_14040 0.84 -1.1 3,289,234 - CA264_14040 0.86 +0.2 3,289,256 + CA264_14040 0.88 -0.4 3,289,349 + -0.0 3,289,349 + -0.8 3,289,401 + +0.7 3,289,402 - +0.2 3,289,402 - -0.3 3,289,493 - +0.6 3,289,493 - -0.2 3,289,507 - -1.2 3,289,521 + -0.7 3,289,522 - -1.1 3,289,553 - -0.4 3,289,582 + -0.2 3,289,583 - -0.2 3,289,584 + +0.3 3,289,627 + -0.2 3,289,628 - -0.5 3,289,664 - -1.6 3,289,775 + CA264_14045 0.14 +0.5 3,289,776 - CA264_14045 0.14 -0.6 3,289,786 + CA264_14045 0.15 -0.6 3,289,813 + CA264_14045 0.16 +0.1 3,289,814 - CA264_14045 0.17 -0.3 3,289,831 + CA264_14045 0.18 -0.0 3,289,832 - CA264_14045 0.18 +0.1 3,289,844 - CA264_14045 0.19 +0.5 3,289,860 + CA264_14045 0.20 -0.2 3,289,860 + CA264_14045 0.20 -0.1 3,289,915 + CA264_14045 0.24 +0.6 3,290,001 - CA264_14045 0.30 -0.2 3,290,002 + CA264_14045 0.30 -0.0 3,290,002 + CA264_14045 0.30 +0.1 3,290,006 + CA264_14045 0.30 -1.2 3,290,007 - CA264_14045 0.30 -1.4 3,290,057 + CA264_14045 0.34 +0.4 3,290,092 - CA264_14045 0.36 +0.0 3,290,108 + CA264_14045 0.37 -0.7 3,290,109 - CA264_14045 0.37 -0.3 3,290,117 - CA264_14045 0.38 -0.1 3,290,135 + CA264_14045 0.39 +0.1 3,290,189 - CA264_14045 0.43 -0.0 3,290,207 + CA264_14045 0.44 +1.2 3,290,210 - CA264_14045 0.45 -0.6 3,290,212 + CA264_14045 0.45 -0.2 3,290,286 + CA264_14045 0.50 -0.5 3,290,286 + CA264_14045 0.50 -0.4 3,290,287 - CA264_14045 0.50 -1.0 3,290,287 - CA264_14045 0.50 +0.1 3,290,287 - CA264_14045 0.50 +0.2 3,290,287 - CA264_14045 0.50 +0.0 3,290,395 + CA264_14045 0.58 +0.2 3,290,398 + CA264_14045 0.58 -0.7 3,290,399 - CA264_14045 0.58 +0.4 3,290,408 - CA264_14045 0.59 +0.3
Or see this region's nucleotide sequence