Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12740 and CA264_12745 are separated by 162 nucleotides CA264_12745 and CA264_12750 are separated by 104 nucleotides CA264_12750 and CA264_12755 are separated by 83 nucleotides
CA264_12740: CA264_12740 - multidrug ABC transporter ATP-binding protein, at 2,969,053 to 2,970,873
_12740
CA264_12745: CA264_12745 - hypothetical protein, at 2,971,036 to 2,971,530
_12745
CA264_12750: CA264_12750 - hypothetical protein, at 2,971,635 to 2,972,504
_12750
CA264_12755: CA264_12755 - SAM-dependent methyltransferase, at 2,972,588 to 2,973,502
_12755
Position (kb)
2971
2972
2973 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2970.914 kb on + strand at 2970.914 kb on + strand at 2970.914 kb on + strand at 2970.952 kb on + strand at 2970.959 kb on + strand at 2970.960 kb on - strand at 2970.963 kb on + strand at 2970.963 kb on + strand at 2970.963 kb on + strand at 2970.964 kb on - strand at 2970.964 kb on - strand at 2970.971 kb on + strand at 2970.971 kb on + strand at 2970.972 kb on - strand at 2970.972 kb on - strand at 2970.976 kb on - strand at 2970.977 kb on + strand at 2970.977 kb on + strand at 2970.978 kb on - strand at 2970.986 kb on + strand at 2970.987 kb on - strand at 2971.118 kb on - strand, within CA264_12745 at 2971.118 kb on - strand, within CA264_12745 at 2971.121 kb on - strand, within CA264_12745 at 2971.150 kb on + strand, within CA264_12745 at 2971.183 kb on + strand, within CA264_12745 at 2971.184 kb on - strand, within CA264_12745 at 2971.187 kb on - strand, within CA264_12745 at 2971.194 kb on + strand, within CA264_12745 at 2971.258 kb on + strand, within CA264_12745 at 2971.259 kb on - strand, within CA264_12745 at 2971.375 kb on + strand, within CA264_12745 at 2971.375 kb on + strand, within CA264_12745 at 2971.375 kb on + strand, within CA264_12745 at 2971.375 kb on + strand, within CA264_12745 at 2971.376 kb on - strand, within CA264_12745 at 2971.514 kb on + strand at 2971.515 kb on - strand at 2971.528 kb on + strand at 2971.529 kb on - strand at 2971.584 kb on - strand at 2971.584 kb on - strand at 2971.596 kb on + strand at 2971.604 kb on + strand at 2971.605 kb on - strand at 2971.771 kb on + strand, within CA264_12750 at 2971.778 kb on - strand, within CA264_12750 at 2971.778 kb on - strand, within CA264_12750 at 2971.783 kb on - strand, within CA264_12750 at 2971.783 kb on - strand, within CA264_12750 at 2971.808 kb on + strand, within CA264_12750 at 2971.872 kb on - strand, within CA264_12750 at 2971.939 kb on - strand, within CA264_12750 at 2971.969 kb on + strand, within CA264_12750 at 2972.017 kb on - strand, within CA264_12750 at 2972.093 kb on + strand, within CA264_12750 at 2972.203 kb on + strand, within CA264_12750 at 2972.247 kb on + strand, within CA264_12750 at 2972.248 kb on - strand, within CA264_12750 at 2972.336 kb on + strand, within CA264_12750 at 2972.388 kb on + strand, within CA264_12750 at 2972.389 kb on - strand, within CA264_12750 at 2972.389 kb on - strand, within CA264_12750 at 2972.389 kb on - strand, within CA264_12750 at 2972.420 kb on + strand at 2972.455 kb on - strand at 2972.455 kb on - strand at 2972.509 kb on - strand at 2972.509 kb on - strand at 2972.548 kb on - strand at 2972.548 kb on - strand at 2972.573 kb on + strand at 2972.753 kb on + strand, within CA264_12755 at 2972.753 kb on + strand, within CA264_12755 at 2972.753 kb on + strand, within CA264_12755 at 2972.754 kb on - strand, within CA264_12755 at 2972.754 kb on - strand, within CA264_12755 at 2972.777 kb on + strand, within CA264_12755 at 2972.859 kb on - strand, within CA264_12755 at 2973.071 kb on + strand, within CA264_12755 at 2973.214 kb on - strand, within CA264_12755 at 2973.320 kb on + strand, within CA264_12755 at 2973.344 kb on + strand, within CA264_12755 at 2973.410 kb on - strand, within CA264_12755 at 2973.416 kb on - strand at 2973.471 kb on + strand at 2973.473 kb on + strand at 2973.474 kb on - strand at 2973.474 kb on - strand at 2973.474 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 2,970,914 + +0.2 2,970,914 + +0.4 2,970,914 + +2.6 2,970,952 + -0.5 2,970,959 + +0.3 2,970,960 - -1.2 2,970,963 + +1.2 2,970,963 + +0.5 2,970,963 + +0.3 2,970,964 - -1.0 2,970,964 - +2.1 2,970,971 + -0.1 2,970,971 + +0.5 2,970,972 - +0.6 2,970,972 - +0.2 2,970,976 - +1.5 2,970,977 + +0.0 2,970,977 + -0.4 2,970,978 - -0.5 2,970,986 + -0.0 2,970,987 - +0.2 2,971,118 - CA264_12745 0.17 +1.2 2,971,118 - CA264_12745 0.17 +0.4 2,971,121 - CA264_12745 0.17 -0.1 2,971,150 + CA264_12745 0.23 +0.6 2,971,183 + CA264_12745 0.30 -0.4 2,971,184 - CA264_12745 0.30 +0.8 2,971,187 - CA264_12745 0.31 -0.8 2,971,194 + CA264_12745 0.32 -0.8 2,971,258 + CA264_12745 0.45 +0.1 2,971,259 - CA264_12745 0.45 +0.4 2,971,375 + CA264_12745 0.68 +0.4 2,971,375 + CA264_12745 0.68 +0.1 2,971,375 + CA264_12745 0.68 -0.6 2,971,375 + CA264_12745 0.68 +0.6 2,971,376 - CA264_12745 0.69 +0.2 2,971,514 + +1.0 2,971,515 - +0.8 2,971,528 + +0.6 2,971,529 - +0.3 2,971,584 - -0.0 2,971,584 - +0.4 2,971,596 + -0.8 2,971,604 + -0.1 2,971,605 - -0.3 2,971,771 + CA264_12750 0.16 -0.4 2,971,778 - CA264_12750 0.16 -0.4 2,971,778 - CA264_12750 0.16 -0.3 2,971,783 - CA264_12750 0.17 +0.5 2,971,783 - CA264_12750 0.17 -1.0 2,971,808 + CA264_12750 0.20 -0.5 2,971,872 - CA264_12750 0.27 +0.0 2,971,939 - CA264_12750 0.35 -0.7 2,971,969 + CA264_12750 0.38 -0.8 2,972,017 - CA264_12750 0.44 -0.1 2,972,093 + CA264_12750 0.53 -1.6 2,972,203 + CA264_12750 0.65 -0.6 2,972,247 + CA264_12750 0.70 +0.1 2,972,248 - CA264_12750 0.70 -1.0 2,972,336 + CA264_12750 0.81 -0.1 2,972,388 + CA264_12750 0.87 -0.1 2,972,389 - CA264_12750 0.87 -0.1 2,972,389 - CA264_12750 0.87 -1.0 2,972,389 - CA264_12750 0.87 -0.9 2,972,420 + +0.0 2,972,455 - -0.6 2,972,455 - -1.9 2,972,509 - -0.3 2,972,509 - -0.4 2,972,548 - +0.1 2,972,548 - +0.1 2,972,573 + -0.6 2,972,753 + CA264_12755 0.18 -1.1 2,972,753 + CA264_12755 0.18 +0.2 2,972,753 + CA264_12755 0.18 +0.4 2,972,754 - CA264_12755 0.18 +2.4 2,972,754 - CA264_12755 0.18 +1.1 2,972,777 + CA264_12755 0.21 +0.2 2,972,859 - CA264_12755 0.30 +0.2 2,973,071 + CA264_12755 0.53 -0.3 2,973,214 - CA264_12755 0.68 +0.3 2,973,320 + CA264_12755 0.80 +2.1 2,973,344 + CA264_12755 0.83 +0.1 2,973,410 - CA264_12755 0.90 -0.2 2,973,416 - +0.1 2,973,471 + +0.1 2,973,473 + +0.8 2,973,474 - +0.4 2,973,474 - +0.1 2,973,474 - +0.0
Or see this region's nucleotide sequence