Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02570 and CA264_02575 are separated by 236 nucleotides CA264_02575 and CA264_02580 are separated by 86 nucleotides CA264_02580 and CA264_02585 are separated by 7 nucleotides CA264_02585 and CA264_02590 are separated by 219 nucleotides CA264_02590 and CA264_02595 are separated by 195 nucleotides
CA264_02570: CA264_02570 - hypothetical protein, at 599,718 to 600,008
_02570
CA264_02575: CA264_02575 - potassium transporter KefB, at 600,245 to 600,583
_02575
CA264_02580: CA264_02580 - transcriptional regulator, at 600,670 to 600,978
_02580
CA264_02585: CA264_02585 - hypothetical protein, at 600,986 to 601,609
_02585
CA264_02590: CA264_02590 - ribosomal subunit interface protein, at 601,829 to 602,134
_02590
CA264_02595: CA264_02595 - oxidoreductase, at 602,330 to 603,112
_02595
Position (kb)
600
601
602 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 600.008 kb on + strand at 600.078 kb on - strand at 600.099 kb on + strand at 600.099 kb on + strand at 600.099 kb on + strand at 600.136 kb on + strand at 600.171 kb on - strand at 600.191 kb on + strand at 600.192 kb on - strand at 600.221 kb on - strand at 600.303 kb on + strand, within CA264_02575 at 600.304 kb on - strand, within CA264_02575 at 600.304 kb on - strand, within CA264_02575 at 600.305 kb on + strand, within CA264_02575 at 600.323 kb on - strand, within CA264_02575 at 600.323 kb on - strand, within CA264_02575 at 600.324 kb on + strand, within CA264_02575 at 600.428 kb on - strand, within CA264_02575 at 600.589 kb on + strand at 600.599 kb on - strand at 600.603 kb on + strand at 600.715 kb on + strand, within CA264_02580 at 600.715 kb on + strand, within CA264_02580 at 600.715 kb on + strand, within CA264_02580 at 600.716 kb on - strand, within CA264_02580 at 600.759 kb on - strand, within CA264_02580 at 600.951 kb on + strand at 600.955 kb on + strand at 600.955 kb on + strand at 600.956 kb on - strand at 600.956 kb on - strand at 600.957 kb on + strand at 600.964 kb on + strand at 600.964 kb on + strand at 600.964 kb on + strand at 600.965 kb on - strand at 600.980 kb on + strand at 601.005 kb on + strand at 601.007 kb on + strand at 601.008 kb on - strand at 601.020 kb on + strand at 601.020 kb on + strand at 601.025 kb on + strand at 601.025 kb on + strand at 601.025 kb on + strand at 601.026 kb on - strand at 601.081 kb on - strand, within CA264_02585 at 601.157 kb on - strand, within CA264_02585 at 601.196 kb on + strand, within CA264_02585 at 601.226 kb on + strand, within CA264_02585 at 601.271 kb on + strand, within CA264_02585 at 601.440 kb on + strand, within CA264_02585 at 601.440 kb on + strand, within CA264_02585 at 601.441 kb on - strand, within CA264_02585 at 601.445 kb on + strand, within CA264_02585 at 601.446 kb on - strand, within CA264_02585 at 601.446 kb on - strand, within CA264_02585 at 601.487 kb on + strand, within CA264_02585 at 601.559 kb on - strand at 601.559 kb on - strand at 601.647 kb on - strand at 601.667 kb on + strand at 601.668 kb on - strand at 601.668 kb on - strand at 601.669 kb on + strand at 601.669 kb on + strand at 601.669 kb on + strand at 601.674 kb on + strand at 601.680 kb on - strand at 601.759 kb on + strand at 601.815 kb on + strand at 601.835 kb on + strand at 601.836 kb on - strand at 601.836 kb on - strand at 601.837 kb on + strand at 601.857 kb on + strand at 601.869 kb on + strand, within CA264_02590 at 601.870 kb on - strand, within CA264_02590 at 601.885 kb on - strand, within CA264_02590 at 601.903 kb on - strand, within CA264_02590 at 601.903 kb on - strand, within CA264_02590 at 602.000 kb on - strand, within CA264_02590 at 602.049 kb on + strand, within CA264_02590 at 602.050 kb on - strand, within CA264_02590 at 602.078 kb on + strand, within CA264_02590 at 602.079 kb on - strand, within CA264_02590 at 602.177 kb on + strand at 602.177 kb on + strand at 602.178 kb on - strand at 602.180 kb on - strand at 602.187 kb on + strand at 602.187 kb on + strand at 602.285 kb on + strand at 602.286 kb on - strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.291 kb on + strand at 602.292 kb on - strand at 602.292 kb on - strand at 602.299 kb on + strand at 602.300 kb on - strand at 602.300 kb on - strand at 602.300 kb on - strand at 602.302 kb on - strand at 602.316 kb on + strand at 602.317 kb on - strand at 602.342 kb on + strand at 602.388 kb on + strand at 602.388 kb on + strand at 602.398 kb on + strand at 602.435 kb on - strand, within CA264_02595 at 602.505 kb on + strand, within CA264_02595 at 602.506 kb on - strand, within CA264_02595 at 602.526 kb on + strand, within CA264_02595
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 600,008 + -0.2 600,078 - +0.9 600,099 + +0.9 600,099 + +0.4 600,099 + -0.7 600,136 + +1.4 600,171 - +0.7 600,191 + -0.5 600,192 - +0.1 600,221 - -1.9 600,303 + CA264_02575 0.17 +0.3 600,304 - CA264_02575 0.17 +0.0 600,304 - CA264_02575 0.17 +0.5 600,305 + CA264_02575 0.18 -0.4 600,323 - CA264_02575 0.23 +0.9 600,323 - CA264_02575 0.23 -0.1 600,324 + CA264_02575 0.23 +0.9 600,428 - CA264_02575 0.54 -0.2 600,589 + +0.2 600,599 - +0.6 600,603 + +0.7 600,715 + CA264_02580 0.15 -1.0 600,715 + CA264_02580 0.15 +0.2 600,715 + CA264_02580 0.15 +0.5 600,716 - CA264_02580 0.15 +0.5 600,759 - CA264_02580 0.29 +0.6 600,951 + +0.1 600,955 + +0.3 600,955 + -0.3 600,956 - -0.3 600,956 - +0.5 600,957 + -0.5 600,964 + +0.8 600,964 + -2.0 600,964 + -0.2 600,965 - +1.8 600,980 + -0.3 601,005 + +1.1 601,007 + -0.0 601,008 - -1.7 601,020 + -1.3 601,020 + -0.2 601,025 + -0.0 601,025 + +0.3 601,025 + +0.9 601,026 - -0.1 601,081 - CA264_02585 0.15 -0.0 601,157 - CA264_02585 0.27 -1.0 601,196 + CA264_02585 0.34 -0.0 601,226 + CA264_02585 0.38 +0.9 601,271 + CA264_02585 0.46 +0.1 601,440 + CA264_02585 0.73 +0.1 601,440 + CA264_02585 0.73 +0.1 601,441 - CA264_02585 0.73 +0.4 601,445 + CA264_02585 0.74 +0.1 601,446 - CA264_02585 0.74 +0.2 601,446 - CA264_02585 0.74 +1.0 601,487 + CA264_02585 0.80 +1.1 601,559 - -1.0 601,559 - -0.3 601,647 - +0.3 601,667 + -1.2 601,668 - +0.5 601,668 - -1.3 601,669 + +0.4 601,669 + -0.7 601,669 + +0.3 601,674 + +0.1 601,680 - -0.0 601,759 + +0.0 601,815 + -0.5 601,835 + +0.1 601,836 - -0.6 601,836 - +0.0 601,837 + -0.3 601,857 + -1.4 601,869 + CA264_02590 0.13 -0.0 601,870 - CA264_02590 0.13 +1.3 601,885 - CA264_02590 0.18 -0.3 601,903 - CA264_02590 0.24 -0.3 601,903 - CA264_02590 0.24 -2.4 602,000 - CA264_02590 0.56 -0.6 602,049 + CA264_02590 0.72 +0.3 602,050 - CA264_02590 0.72 -0.4 602,078 + CA264_02590 0.81 -0.3 602,079 - CA264_02590 0.82 +1.1 602,177 + -0.0 602,177 + +0.2 602,178 - +0.6 602,180 - -0.4 602,187 + -0.4 602,187 + -0.2 602,285 + +0.9 602,286 - -0.1 602,287 + -0.2 602,287 + +0.0 602,287 + +0.9 602,287 + +0.5 602,291 + +0.0 602,292 - -0.3 602,292 - -0.2 602,299 + +0.3 602,300 - -0.6 602,300 - -0.3 602,300 - -0.5 602,302 - -0.1 602,316 + -0.5 602,317 - +0.3 602,342 + +1.0 602,388 + +0.2 602,388 + -0.2 602,398 + -2.1 602,435 - CA264_02595 0.13 +1.1 602,505 + CA264_02595 0.22 +0.2 602,506 - CA264_02595 0.22 -0.1 602,526 + CA264_02595 0.25 +1.1
Or see this region's nucleotide sequence