Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01500 and CA264_01505 are separated by 107 nucleotides CA264_01505 and CA264_01510 are separated by 46 nucleotides CA264_01510 and CA264_01515 are separated by 53 nucleotides
CA264_01500: CA264_01500 - glycosyl transferase family 1, at 355,005 to 356,153
_01500
CA264_01505: CA264_01505 - hypothetical protein, at 356,261 to 356,800
_01505
CA264_01510: CA264_01510 - hypothetical protein, at 356,847 to 357,368
_01510
CA264_01515: CA264_01515 - hypothetical protein, at 357,422 to 358,621
_01515
Position (kb) 356
357
358 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 356.147 kb on + strand at 356.147 kb on + strand at 356.159 kb on - strand at 356.161 kb on - strand at 356.193 kb on - strand at 356.208 kb on - strand at 356.233 kb on + strand at 356.234 kb on - strand at 356.274 kb on + strand at 356.274 kb on + strand at 356.275 kb on - strand at 356.277 kb on + strand at 356.278 kb on - strand at 356.280 kb on + strand at 356.292 kb on - strand at 356.399 kb on - strand, within CA264_01505 at 356.399 kb on - strand, within CA264_01505 at 356.405 kb on - strand, within CA264_01505 at 356.409 kb on - strand, within CA264_01505 at 356.656 kb on + strand, within CA264_01505 at 356.786 kb on + strand at 356.786 kb on + strand at 356.786 kb on + strand at 356.787 kb on - strand at 356.825 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.933 kb on - strand, within CA264_01510 at 356.985 kb on + strand, within CA264_01510 at 356.986 kb on - strand, within CA264_01510 at 357.054 kb on + strand, within CA264_01510 at 357.080 kb on - strand, within CA264_01510 at 357.084 kb on - strand, within CA264_01510 at 357.084 kb on - strand, within CA264_01510 at 357.160 kb on + strand, within CA264_01510 at 357.161 kb on - strand, within CA264_01510 at 357.161 kb on - strand, within CA264_01510 at 357.231 kb on - strand, within CA264_01510 at 357.283 kb on - strand, within CA264_01510 at 357.297 kb on - strand, within CA264_01510 at 357.383 kb on - strand at 357.407 kb on - strand at 357.407 kb on - strand at 357.424 kb on - strand at 357.437 kb on - strand at 357.511 kb on + strand at 357.643 kb on - strand, within CA264_01515 at 357.667 kb on + strand, within CA264_01515 at 357.667 kb on + strand, within CA264_01515 at 357.671 kb on + strand, within CA264_01515 at 357.672 kb on - strand, within CA264_01515 at 357.678 kb on - strand, within CA264_01515 at 357.678 kb on - strand, within CA264_01515 at 357.703 kb on - strand, within CA264_01515 at 357.706 kb on + strand, within CA264_01515 at 357.706 kb on + strand, within CA264_01515 at 357.707 kb on - strand, within CA264_01515 at 357.889 kb on + strand, within CA264_01515 at 357.889 kb on + strand, within CA264_01515 at 357.944 kb on + strand, within CA264_01515 at 357.975 kb on + strand, within CA264_01515 at 357.975 kb on + strand, within CA264_01515 at 358.030 kb on + strand, within CA264_01515 at 358.153 kb on + strand, within CA264_01515 at 358.154 kb on - strand, within CA264_01515 at 358.202 kb on - strand, within CA264_01515 at 358.319 kb on - strand, within CA264_01515
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 356,147 + +0.3 356,147 + +0.6 356,159 - +0.0 356,161 - -0.7 356,193 - +0.5 356,208 - -0.3 356,233 + -1.9 356,234 - -0.2 356,274 + +0.2 356,274 + -0.6 356,275 - -0.6 356,277 + -0.3 356,278 - +0.2 356,280 + -0.7 356,292 - -0.4 356,399 - CA264_01505 0.26 -0.3 356,399 - CA264_01505 0.26 -0.2 356,405 - CA264_01505 0.27 -0.4 356,409 - CA264_01505 0.27 +0.1 356,656 + CA264_01505 0.73 +3.1 356,786 + +0.1 356,786 + -0.7 356,786 + -0.5 356,787 - -0.6 356,825 + -0.0 356,827 + -0.5 356,827 + +1.2 356,827 + -0.2 356,827 + +0.2 356,933 - CA264_01510 0.16 +0.1 356,985 + CA264_01510 0.26 +0.7 356,986 - CA264_01510 0.27 -0.9 357,054 + CA264_01510 0.40 +0.6 357,080 - CA264_01510 0.45 +0.5 357,084 - CA264_01510 0.45 +0.6 357,084 - CA264_01510 0.45 +0.2 357,160 + CA264_01510 0.60 +0.3 357,161 - CA264_01510 0.60 -0.2 357,161 - CA264_01510 0.60 -0.8 357,231 - CA264_01510 0.74 +1.1 357,283 - CA264_01510 0.84 -1.0 357,297 - CA264_01510 0.86 +0.6 357,383 - +0.4 357,407 - -0.5 357,407 - -0.2 357,424 - -1.1 357,437 - +0.3 357,511 + -0.0 357,643 - CA264_01515 0.18 +0.5 357,667 + CA264_01515 0.20 -0.7 357,667 + CA264_01515 0.20 -2.1 357,671 + CA264_01515 0.21 +0.7 357,672 - CA264_01515 0.21 -1.1 357,678 - CA264_01515 0.21 -0.1 357,678 - CA264_01515 0.21 +0.3 357,703 - CA264_01515 0.23 -0.4 357,706 + CA264_01515 0.24 -0.2 357,706 + CA264_01515 0.24 -1.9 357,707 - CA264_01515 0.24 -0.3 357,889 + CA264_01515 0.39 +0.2 357,889 + CA264_01515 0.39 +0.1 357,944 + CA264_01515 0.43 -0.2 357,975 + CA264_01515 0.46 -0.3 357,975 + CA264_01515 0.46 +0.7 358,030 + CA264_01515 0.51 -0.2 358,153 + CA264_01515 0.61 -0.1 358,154 - CA264_01515 0.61 -0.3 358,202 - CA264_01515 0.65 -0.5 358,319 - CA264_01515 0.75 -1.0
Or see this region's nucleotide sequence