Experiment: m.b. Vancomycin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01260 and CA264_01265 are separated by 99 nucleotides CA264_01265 and CA264_01270 are separated by 12 nucleotides CA264_01270 and CA264_01275 overlap by 1 nucleotides
CA264_01260: CA264_01260 - hypothetical protein, at 302,424 to 303,404
_01260
CA264_01265: CA264_01265 - 50S ribosomal protein L9, at 303,504 to 303,947
_01265
CA264_01270: CA264_01270 - 30S ribosomal protein S18, at 303,960 to 304,211
_01270
CA264_01275: CA264_01275 - 30S ribosomal protein S6, at 304,211 to 304,579
_01275
Position (kb) 303
304 Strain fitness (log2 ratio) -1
0
1
2 at 302.545 kb on + strand, within CA264_01260 at 302.601 kb on - strand, within CA264_01260 at 302.601 kb on - strand, within CA264_01260 at 302.623 kb on + strand, within CA264_01260 at 302.634 kb on + strand, within CA264_01260 at 302.652 kb on - strand, within CA264_01260 at 302.652 kb on - strand, within CA264_01260 at 302.653 kb on + strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.734 kb on + strand, within CA264_01260 at 302.734 kb on + strand, within CA264_01260 at 302.734 kb on + strand, within CA264_01260 at 302.746 kb on + strand, within CA264_01260 at 302.902 kb on + strand, within CA264_01260 at 302.902 kb on + strand, within CA264_01260 at 302.902 kb on + strand, within CA264_01260 at 302.903 kb on - strand, within CA264_01260 at 302.903 kb on - strand, within CA264_01260 at 303.039 kb on + strand, within CA264_01260 at 303.040 kb on - strand, within CA264_01260 at 303.040 kb on - strand, within CA264_01260 at 303.041 kb on + strand, within CA264_01260 at 303.041 kb on + strand, within CA264_01260 at 303.067 kb on + strand, within CA264_01260 at 303.106 kb on - strand, within CA264_01260 at 303.106 kb on - strand, within CA264_01260 at 303.151 kb on + strand, within CA264_01260 at 303.151 kb on + strand, within CA264_01260 at 303.191 kb on + strand, within CA264_01260 at 303.200 kb on - strand, within CA264_01260 at 303.200 kb on - strand, within CA264_01260 at 303.382 kb on - strand at 303.428 kb on + strand at 303.438 kb on + strand at 303.480 kb on - strand at 303.609 kb on - strand, within CA264_01265 at 303.622 kb on - strand, within CA264_01265 at 304.657 kb on - strand at 304.665 kb on - strand at 304.678 kb on + strand at 304.717 kb on + strand at 304.720 kb on + strand at 304.720 kb on + strand at 304.720 kb on + strand at 304.720 kb on + strand at 304.721 kb on - strand at 304.911 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.008 mg/ml remove 302,545 + CA264_01260 0.12 -0.4 302,601 - CA264_01260 0.18 -0.6 302,601 - CA264_01260 0.18 -0.3 302,623 + CA264_01260 0.20 -0.1 302,634 + CA264_01260 0.21 +1.1 302,652 - CA264_01260 0.23 +2.0 302,652 - CA264_01260 0.23 -0.3 302,653 + CA264_01260 0.23 +0.3 302,654 - CA264_01260 0.23 +0.5 302,654 - CA264_01260 0.23 -0.3 302,654 - CA264_01260 0.23 -0.5 302,654 - CA264_01260 0.23 -1.0 302,734 + CA264_01260 0.32 +0.2 302,734 + CA264_01260 0.32 -0.5 302,734 + CA264_01260 0.32 -0.5 302,746 + CA264_01260 0.33 +0.2 302,902 + CA264_01260 0.49 +1.3 302,902 + CA264_01260 0.49 +0.3 302,902 + CA264_01260 0.49 +1.2 302,903 - CA264_01260 0.49 -0.8 302,903 - CA264_01260 0.49 -0.3 303,039 + CA264_01260 0.63 +0.6 303,040 - CA264_01260 0.63 -0.4 303,040 - CA264_01260 0.63 +0.2 303,041 + CA264_01260 0.63 +0.1 303,041 + CA264_01260 0.63 +0.1 303,067 + CA264_01260 0.66 +1.1 303,106 - CA264_01260 0.70 +0.1 303,106 - CA264_01260 0.70 -1.4 303,151 + CA264_01260 0.74 +0.3 303,151 + CA264_01260 0.74 -0.2 303,191 + CA264_01260 0.78 +0.3 303,200 - CA264_01260 0.79 +0.2 303,200 - CA264_01260 0.79 +0.1 303,382 - +0.0 303,428 + +0.8 303,438 + +1.1 303,480 - +0.6 303,609 - CA264_01265 0.24 +0.2 303,622 - CA264_01265 0.27 -1.1 304,657 - -0.0 304,665 - -0.1 304,678 + -0.7 304,717 + -0.5 304,720 + -0.2 304,720 + -0.2 304,720 + +0.2 304,720 + -0.4 304,721 - +0.3 304,911 + -0.4
Or see this region's nucleotide sequence