Strain Fitness in Pseudomonas simiae WCS417 around PS417_00450

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
88,296	-		PS417_00445	0.49	-0.5
88,428	-		PS417_00445	0.56	+0.3
88,428	-		PS417_00445	0.56	-0.6
88,962	+		PS417_00445	0.86	+0.6
88,962	+		PS417_00445	0.86	+0.4
88,963	-				+0.7
89,068	+				+0.7
89,173	+				-2.9
89,174	-				-0.0
89,216	-				+0.1
89,216	-				+0.4
89,220	+				+0.1
89,220	+				-1.8
89,221	-				+0.2
89,221	-				-1.6
89,221	-				-0.1
89,236	+				-0.3
89,237	-				+0.4
89,319	+				+0.8
89,469	-		PS417_00450	0.18	-0.2
89,501	-		PS417_00450	0.20	-1.8
89,554	+		PS417_00450	0.24	+0.3
89,554	+		PS417_00450	0.24	+0.3
89,555	-		PS417_00450	0.24	+1.4
90,153	+		PS417_00450	0.69	+0.2
90,154	-		PS417_00450	0.69	+1.4
90,324	+		PS417_00450	0.82	-2.1
90,475	+				-0.3
90,475	+				+0.4
90,475	+				+1.1
90,476	-				+0.1
90,535	-				+0.7
90,589	-				-0.9
90,594	-				-0.6
90,594	-				+0.5
90,610	-				+4.0
90,643	-				+0.2
90,675	+				-1.9
90,675	+				-1.1
90,676	-				-1.6
90,676	-				-0.1
90,676	-				+1.1
90,692	-				+2.0
90,729	+				-0.8
90,730	-				+0.2
90,908	+				-2.8
90,908	+				-1.8
90,909	-				+0.0
90,925	-				+0.0
90,981	-		PS417_00455	0.11	-1.6
91,143	-		PS417_00455	0.68	-1.4
91,143	-		PS417_00455	0.68	+0.3
91,231	+				+0.2
91,232	-				-0.6
91,274	-				+1.2
91,283	-				-0.8
91,289	+				-1.9
91,289	+				-0.0
91,300	-				+0.6