Strain Fitness in Pseudomonas simiae WCS417 around PS417_04320

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
967,073	+		PS417_04310	0.18	+0.6
967,073	+		PS417_04310	0.18	+0.5
967,074	-		PS417_04310	0.18	-0.2
967,424	+				-0.3
967,425	-				+0.2
967,431	+				+1.7
967,431	+				-0.5
967,432	-				+1.1
967,432	-				+0.7
967,432	-				-1.3
967,433	+				-0.5
967,433	+				+2.1
967,458	+				-0.5
967,478	+				+0.3
967,507	-		PS417_04315	0.13	-1.5
967,507	-		PS417_04315	0.13	+3.2
967,507	-		PS417_04315	0.13	-0.7
967,527	+		PS417_04315	0.17	-2.6
967,527	+		PS417_04315	0.17	+0.8
967,935	+		PS417_04315	0.83	-0.1
967,936	-		PS417_04315	0.83	+2.7
967,936	-		PS417_04315	0.83	-0.3
967,945	-		PS417_04315	0.85	+1.0
967,966	-		PS417_04315	0.88	-0.5
967,980	+				-0.7
967,981	-				-1.1
967,988	+				-1.7
968,017	-				-0.9
968,059	+				-1.8
968,059	+				+0.5
968,059	+				-0.7
968,059	+				+1.6
968,138	-				+0.5
968,148	-				-0.8
968,432	+		PS417_04320	0.40	+1.9
968,432	+				+5.1
968,432	+		PS417_04320	0.40	-0.1
968,433	-		PS417_04320	0.41	-0.7
968,454	+		PS417_04320	0.43	+0.1
968,534	+		PS417_04320	0.52	+0.1
968,961	+				-0.5
968,979	-				-0.1
968,979	-				+0.2
969,042	+				-0.8
969,042	+				-0.8
969,043	-				-0.7
969,071	+				-0.1
969,071	+				-1.8
969,072	-				-2.6
969,072	-				-1.2
969,075	+				+1.5
969,075	+				-0.8
969,075	+				-0.2
969,076	-				-2.5
969,346	+				+1.1