Strain Fitness in Pseudomonas simiae WCS417 around PS417_28205

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
6,087,872	+		PS417_28195	0.46	-0.8
6,087,872	+		PS417_28195	0.46	-0.3
6,087,873	-		PS417_28195	0.46	-0.6
6,087,873	-		PS417_28195	0.46	+0.5
6,087,944	+		PS417_28195	0.55	+0.6
6,087,945	-		PS417_28195	0.55	+0.2
6,088,182	-		PS417_28195	0.84	-1.4
6,088,182	-		PS417_28195	0.84	+0.4
6,088,202	+		PS417_28195	0.86	+0.3
6,088,202	+		PS417_28195	0.86	+1.4
6,088,203	-		PS417_28195	0.86	+0.9
6,088,235	+		PS417_28195	0.90	+0.3
6,088,236	-				-0.5
6,088,236	-				+0.2
6,088,301	+				-2.2
6,088,301	+				-1.9
6,088,469	-		PS417_28200	0.60	+0.1
6,088,469	-		PS417_28200	0.60	+0.5
6,088,510	+		PS417_28200	0.76	+2.1
6,088,574	+				-0.9
6,088,575	-				-1.4
6,088,575	-				+0.6
6,088,659	+				+0.9
6,088,660	-				+2.4
6,088,747	-		PS417_28205	0.14	+0.3
6,089,104	-		PS417_28205	0.42	-1.5
6,089,340	+		PS417_28205	0.60	-0.6
6,089,340	+		PS417_28205	0.60	-0.4
6,089,341	-		PS417_28205	0.60	-1.9
6,089,341	-		PS417_28205	0.60	-1.1
6,089,341	-		PS417_28205	0.60	-2.9
6,089,341	-		PS417_28205	0.60	+0.9
6,089,354	-		PS417_28205	0.61	-1.7
6,089,354	-		PS417_28205	0.61	-2.6
6,089,364	+		PS417_28205	0.62	-3.0
6,089,364	+		PS417_28205	0.62	-0.2
6,089,364	+		PS417_28205	0.62	-0.4
6,089,364	+		PS417_28205	0.62	-0.4
6,089,365	-		PS417_28205	0.62	-2.6
6,089,365	-		PS417_28205	0.62	-0.9
6,089,365	-		PS417_28205	0.62	+0.6
6,089,365	-		PS417_28205	0.62	+0.9
6,089,365	-		PS417_28205	0.62	+0.3
6,089,365	-		PS417_28205	0.62	-0.5
6,089,403	+		PS417_28205	0.65	-0.8
6,089,464	-		PS417_28205	0.69	-1.2
6,089,464	-		PS417_28205	0.69	+0.2
6,089,779	+				-2.3
6,089,790	+				+1.9
6,089,790	+				-0.2
6,089,790	+				-0.4
6,089,791	-				-0.0
6,089,791	-				+0.8
6,089,910	+				-0.7
6,089,911	-				+0.1
6,089,917	+				+0.5