Strain Fitness in Pseudomonas simiae WCS417 around PS417_27680

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,969,980	-		PS417_27670	0.89	-1.3
5,970,311	+				+0.2
5,970,311	+				-1.6
5,970,312	-				+0.3
5,970,527	+		PS417_27675	0.47	-2.0
5,970,527	+		PS417_27675	0.47	+0.8
5,970,528	-		PS417_27675	0.47	-1.9
5,970,544	+		PS417_27675	0.50	+0.0
5,970,545	-		PS417_27675	0.50	-0.3
5,970,847	+				+0.1
5,970,848	-				-0.4
5,970,896	+				-0.4
5,970,897	-				-2.6
5,970,897	-				+0.6
5,970,897	-				-0.4
5,971,006	+				-0.6
5,971,006	+				-2.6
5,971,236	-		PS417_27680	0.14	-0.6
5,971,353	+		PS417_27680	0.20	-1.1
5,971,354	-		PS417_27680	0.20	+0.5
5,971,466	-		PS417_27680	0.26	-1.0
5,971,573	+		PS417_27680	0.32	-2.1
5,971,664	+		PS417_27680	0.36	-1.5
5,971,712	-		PS417_27680	0.39	-2.5
5,971,726	+		PS417_27680	0.40	-1.2
5,971,727	-		PS417_27680	0.40	-1.0
5,971,727	-		PS417_27680	0.40	-0.0
5,971,727	-		PS417_27680	0.40	-0.1
5,972,032	+		PS417_27680	0.56	-0.2
5,972,062	+		PS417_27680	0.57	-1.9
5,972,296	+		PS417_27680	0.69	-0.8
5,972,297	-		PS417_27680	0.69	+2.6
5,972,370	+		PS417_27680	0.73	-0.3
5,972,513	-		PS417_27680	0.81	+0.5
5,972,722	+				-0.0
5,972,723	-				+0.2
5,972,993	+				-0.2
5,973,467	-				+2.2
5,973,541	+				-0.7
5,973,541	+				+0.3
5,973,546	-				+0.4
5,973,616	-				+0.2
5,973,706	-		PS417_27690	0.17	-1.8
5,973,706	-		PS417_27690	0.17	+2.2