Strain Fitness in Pseudomonas simiae WCS417 around PS417_26880

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,802,235	+		PS417_26875	0.33	-0.3
5,802,236	-		PS417_26875	0.33	+0.1
5,802,236	-		PS417_26875	0.33	+0.0
5,802,236	-		PS417_26875	0.33	+1.0
5,802,239	-		PS417_26875	0.34	+0.4
5,802,340	+		PS417_26875	0.45	+0.2
5,802,340	+		PS417_26875	0.45	-0.4
5,802,341	-		PS417_26875	0.46	+0.2
5,802,341	-		PS417_26875	0.46	-0.7
5,802,341	-		PS417_26875	0.46	-0.2
5,802,400	+		PS417_26875	0.52	+0.1
5,802,400	+		PS417_26875	0.52	-0.2
5,802,619	+		PS417_26875	0.78	-0.6
5,802,713	-		PS417_26875	0.88	+0.9
5,802,713	-		PS417_26875	0.88	+2.1
5,802,812	+				-0.2
5,802,812	+				-0.0
5,802,812	+				+0.0
5,802,812	+				+0.2
5,802,812	+				-1.8
5,802,813	-				+1.3
5,802,813	-				-0.6
5,802,813	-				-2.5
5,802,813	-				+0.6
5,802,813	-				+0.3
5,802,813	-				-1.4
5,802,817	-				+0.2
5,802,817	-				+0.0
5,802,817	-				-0.8
5,802,817	-				+0.5
5,802,843	+				-2.0
5,802,850	+				+0.6
5,802,850	+				+1.1
5,802,851	-				+1.0
5,802,852	+				+0.2
5,802,853	-				+0.8
5,802,853	-				+0.0
5,802,937	+				-1.1
5,802,937	+				+0.3
5,802,938	-				-0.4
5,803,008	+				+1.0
5,803,008	+				+0.7
5,803,010	+				+0.6
5,803,010	+				-0.0
5,803,020	+				-3.1
5,803,020	+				+0.3
5,803,020	+				-1.2
5,803,020	+				-2.4
5,803,020	+				+3.8
5,803,022	+				-1.8
5,803,022	+				+1.3
5,803,022	+				+0.7
5,803,023	-				+1.6
5,803,023	-				+1.8
5,803,121	+				+0.8
5,803,121	+				+0.3
5,803,358	+		PS417_26880	0.26	+0.6
5,803,359	-		PS417_26880	0.26	+0.6
5,803,370	+		PS417_26880	0.27	+0.5
5,803,667	+		PS417_26880	0.51	+1.0
5,803,667	+		PS417_26880	0.51	-0.8
5,803,667	+		PS417_26880	0.51	-1.5
5,803,733	+		PS417_26880	0.57	+0.0
5,803,734	-		PS417_26880	0.57	+2.0
5,803,739	+		PS417_26880	0.57	-0.5
5,803,739	+		PS417_26880	0.57	+1.7
5,803,739	+		PS417_26880	0.57	+0.5
5,803,740	-		PS417_26880	0.57	+0.4
5,804,208	-				+0.3
5,804,208	-				+0.8
5,804,208	-				+0.4
5,804,221	+				+0.8
5,804,221	+				+1.3
5,804,222	-				+0.3
5,804,222	-				+0.9
5,804,222	-				+2.1
5,804,242	+				+2.1
5,804,243	-				+2.5
5,804,246	+				+1.9
5,804,246	+				+1.1
5,804,246	+				+1.1
5,804,247	-				+0.9
5,804,247	-				+0.9
5,804,251	-				+0.1
5,804,251	-				-1.1
5,804,251	-				-0.7
5,804,266	-				+0.4
5,804,266	-				+0.6
5,804,266	-				-0.4
5,804,344	-				+0.4
5,804,397	+				+2.2
5,804,423	-				-0.3
5,804,423	-				-0.8
5,804,703	+				-0.7
5,804,820	+				+1.1
5,804,820	+				+0.4
5,804,821	-				-1.7
5,804,821	-				+0.0
5,804,823	+				-2.7
5,804,823	+				-1.1
5,804,824	-				-0.5
5,804,824	-				-0.1
5,805,052	-				-0.0
5,805,168	+				-0.4
5,805,168	+				-0.5
5,805,169	-				-0.1
5,805,169	-				-0.5
5,805,169	-				-0.1
5,805,169	-				-2.2
5,805,170	+				-2.3
5,805,182	+				+0.8
5,805,183	-				-0.4
5,805,209	+				+1.4
5,805,247	+				-0.5