Strain Fitness in Pseudomonas simiae WCS417 around PS417_26440
Experiment: Gentamicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Gentamicin 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,717,208 | - | -1.5 | |||
| 5,717,208 | - | +0.2 | |||
| 5,717,232 | - | +0.2 | |||
| 5,717,329 | + | -0.5 | |||
| 5,717,337 | - | -0.1 | |||
| 5,717,337 | - | +4.4 | |||
| 5,719,486 | + | -2.1 | |||
| 5,719,486 | + | -1.4 | |||
| 5,719,493 | + | -0.7 | |||
| 5,719,506 | + | -0.5 | |||
| 5,719,507 | - | -0.8 | |||
| 5,719,507 | - | -1.8 | |||
| 5,719,508 | + | -0.9 | |||
| 5,719,509 | - | -0.8 | |||
| 5,719,598 | + | -0.7 | |||
| 5,719,598 | + | -0.0 | |||
| 5,719,598 | + | +0.2 | |||
| 5,719,598 | + | -1.3 | |||
| 5,719,598 | + | -0.2 | |||
| 5,719,602 | + | -1.3 | |||
| 5,719,715 | + | PS417_26445 | 0.12 | -0.5 | |
| 5,719,775 | + | PS417_26445 | 0.18 | -1.1 |
Or see this region's nucleotide sequence