Strain Fitness in Pseudomonas simiae WCS417 around PS417_26360

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,699,196	+		PS417_26355	0.58	+3.7
5,699,472	+		PS417_26355	0.79	+0.0
5,699,472	+		PS417_26355	0.79	-2.0
5,699,472	+		PS417_26355	0.79	+1.5
5,699,472	+		PS417_26355	0.79	-0.4
5,699,473	-		PS417_26355	0.79	+0.8
5,699,491	-		PS417_26355	0.80	-0.7
5,699,499	+		PS417_26355	0.81	+0.1
5,699,499	+		PS417_26355	0.81	-1.3
5,699,499	+		PS417_26355	0.81	-0.9
5,699,613	+		PS417_26355	0.89	-2.4
5,699,682	+				+1.2
5,699,683	-				+0.5
5,699,683	-				-1.1
5,699,761	+				-0.2
5,699,762	-				-0.4
5,699,814	+				-2.3
5,699,815	-				-2.0
5,699,898	+				+0.0
5,699,898	+				-0.0
5,699,961	+				-0.1
5,699,962	-				+0.4
5,699,962	-				+0.2
5,699,963	+				-0.8
5,699,964	-				-0.3
5,699,995	+				-0.2
5,699,995	+				+0.2
5,699,995	+				-0.8
5,699,995	+				-1.7
5,699,996	-				+0.5
5,699,996	-				+1.3
5,699,996	-				-1.7
5,699,998	+				-0.5
5,699,998	+				+0.3
5,699,998	+				+1.6
5,699,998	+				-0.1
5,699,999	-				-0.7
5,699,999	-				-0.5
5,699,999	-				-0.4
5,700,083	+				-2.3
5,700,083	+				+0.2
5,700,084	-				-1.3
5,700,185	-		PS417_26360	0.17	+0.3
5,700,185	-		PS417_26360	0.17	+0.3
5,700,358	+		PS417_26360	0.37	+3.2
5,700,359	-		PS417_26360	0.37	-0.3
5,700,455	+		PS417_26360	0.49	-0.2
5,700,455	+		PS417_26360	0.49	-0.1
5,700,536	+		PS417_26360	0.58	+0.1
5,700,536	+		PS417_26360	0.58	+0.5
5,700,536	+		PS417_26360	0.58	+2.9
5,700,537	-		PS417_26360	0.58	-0.9
5,700,537	-		PS417_26360	0.58	+1.5
5,700,537	-		PS417_26360	0.58	+3.4
5,700,653	+		PS417_26360	0.72	-3.2
5,700,717	-		PS417_26360	0.80	+2.2
5,700,753	-		PS417_26360	0.84	-0.2
5,700,753	-		PS417_26360	0.84	-0.7
5,700,753	-		PS417_26360	0.84	+1.9
5,700,753	-		PS417_26360	0.84	+1.3
5,700,753	-		PS417_26360	0.84	+0.4
5,700,901	+				-0.8
5,700,901	+				-1.7
5,700,902	-				-1.1
5,701,098	-		PS417_26365	0.12	-0.6
5,701,416	-		PS417_26365	0.34	+0.0