Strain Fitness in Pseudomonas simiae WCS417 around PS417_24880

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,394,328	-				+1.1
5,394,333	+				+1.1
5,394,350	-				+0.0
5,394,350	-				-0.2
5,394,429	+				+0.5
5,394,587	-				-0.0
5,394,587	-				-0.8
5,394,611	+				+2.1
5,394,611	+				+0.4
5,394,612	-				+0.9
5,394,612	-				+0.8
5,394,618	+				-0.5
5,394,618	+				-1.7
5,394,619	-				+0.7
5,394,623	+				+0.4
5,394,623	+				+1.7
5,394,624	-				+2.5
5,394,632	-				+0.6
5,394,701	-				+0.2
5,394,708	+				-1.6
5,394,720	+				-0.8
5,394,742	+				-1.6
5,394,743	-				+1.3
5,394,790	+				+0.1
5,394,795	+				+0.1
5,394,796	-				+0.4
5,394,796	-				-0.7
5,394,796	-				-0.6
5,394,796	-				-0.7
5,394,796	-				-2.1
5,394,839	+				-0.1
5,394,839	+				-1.4
5,394,839	+				+0.0
5,394,839	+				+0.2
5,394,839	+				-1.9
5,394,839	+				+0.6
5,394,839	+				-0.6
5,394,839	+				-0.6
5,394,840	-				-1.5
5,394,840	-				+1.0
5,394,840	-				+0.1
5,394,840	-				-2.3
5,394,840	-				+1.4
5,394,840	-				-1.7
5,395,198	+				+4.8
5,395,198	+				-0.8
5,395,199	-				+2.3
5,395,199	-				+0.3
5,395,202	+				-0.4
5,395,202	+				-0.9
5,395,202	+				+2.4
5,395,202	+				+0.9
5,395,203	-				-0.6
5,395,206	+				+0.8
5,395,206	+				+0.7
5,395,206	+				+0.2
5,395,207	-				-0.7
5,395,207	-				+1.1
5,395,207	-				+0.9
5,395,207	-				-1.6
5,395,269	-				-0.6
5,395,285	+				-1.4
5,395,327	+				-1.1
5,395,327	+				+0.2
5,395,338	+				-1.1
5,395,507	+		PS417_24880	0.21	+0.7
5,395,641	+		PS417_24880	0.35	+1.6
5,395,641	+		PS417_24880	0.35	+0.4
5,395,642	-		PS417_24880	0.35	+0.0
5,395,642	-		PS417_24880	0.35	+1.4
5,395,809	+		PS417_24880	0.53	+0.3
5,395,810	-		PS417_24880	0.53	+0.5
5,395,983	+		PS417_24880	0.70	-0.8
5,396,011	+		PS417_24880	0.73	+1.4
5,396,012	-		PS417_24880	0.73	+0.0
5,396,012	-		PS417_24880	0.73	+1.0
5,396,012	-		PS417_24880	0.73	+0.8
5,396,012	-		PS417_24880	0.73	+0.1
5,396,405	+		PS417_24885	0.28	+1.1
5,396,405	+		PS417_24885	0.28	+1.6
5,396,446	+		PS417_24885	0.45	+1.7
5,396,446	+		PS417_24885	0.45	+3.0
5,396,446	+		PS417_24885	0.45	-1.1
5,396,447	-		PS417_24885	0.45	-0.1
5,396,447	-		PS417_24885	0.45	-0.6
5,396,558	+				+1.8
5,396,586	+				-0.4
5,396,668	+				-2.2
5,396,668	+				-2.4
5,396,668	+				-2.5
5,396,668	+				-0.1
5,396,669	-				+2.1
5,396,672	+				-0.2
5,396,672	+				+0.8
5,396,672	+				+1.0
5,396,672	+				+0.5
5,396,672	+				-1.4
5,396,672	+				+0.7
5,396,731	-				-0.1
5,396,759	+				-0.8
5,396,759	+				+1.0
5,396,760	-				-1.3
5,396,825	+		PS417_24890	0.12	-0.5
5,396,841	-		PS417_24890	0.15	-0.9
5,396,875	+		PS417_24890	0.20	-1.2
5,396,891	+		PS417_24890	0.22	-1.8
5,397,018	+		PS417_24890	0.42	+1.8
5,397,027	-		PS417_24890	0.44	-0.4
5,397,027	-		PS417_24890	0.44	-1.9
5,397,027	-		PS417_24890	0.44	-2.9
5,397,075	+		PS417_24890	0.51	+0.7
5,397,107	+		PS417_24890	0.56	-2.2
5,397,123	+		PS417_24890	0.58	-0.9
5,397,184	-		PS417_24890	0.68	-0.9
5,397,246	+		PS417_24890	0.78	-0.9