Strain Fitness in Pseudomonas simiae WCS417 around PS417_24865

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,391,726	-				+1.8
5,391,733	+				-2.3
5,391,928	+				-0.6
5,391,953	+		PS417_24860	0.12	-0.1
5,391,959	+		PS417_24860	0.13	-0.7
5,392,019	+		PS417_24860	0.22	-1.2
5,392,106	-		PS417_24860	0.34	-0.4
5,392,136	-		PS417_24860	0.38	-1.6
5,392,228	-		PS417_24860	0.51	-0.2
5,392,415	-		PS417_24860	0.77	-0.1
5,392,418	+		PS417_24860	0.77	+0.1
5,392,419	-		PS417_24860	0.77	-0.9
5,392,608	-				+0.4
5,392,625	+				+0.3
5,392,625	+				+0.2
5,392,626	-				-2.0
5,392,645	+				-1.3
5,392,671	+				+0.0
5,392,699	-				-1.1
5,392,762	+				-1.1
5,392,781	+		PS417_24865	0.10	-1.7
5,392,781	+		PS417_24865	0.10	-0.9
5,392,782	-		PS417_24865	0.10	+0.9
5,392,802	+		PS417_24865	0.12	-2.0
5,392,802	+		PS417_24865	0.12	-2.4
5,392,802	+		PS417_24865	0.12	-0.3
5,392,803	-		PS417_24865	0.12	-0.0
5,392,803	-		PS417_24865	0.12	-1.6
5,392,827	+		PS417_24865	0.15	+0.0
5,392,828	-		PS417_24865	0.15	-1.0
5,392,828	-		PS417_24865	0.15	-1.6
5,392,846	-		PS417_24865	0.16	+0.6
5,392,877	+		PS417_24865	0.19	-1.1
5,392,877	+		PS417_24865	0.19	-0.6
5,392,878	-		PS417_24865	0.20	+0.4
5,392,907	+		PS417_24865	0.22	-1.0
5,392,907	+		PS417_24865	0.22	-0.2
5,392,910	-		PS417_24865	0.23	-0.0
5,392,930	+		PS417_24865	0.25	+0.5
5,392,930	+		PS417_24865	0.25	-1.3
5,392,931	-		PS417_24865	0.25	+2.4
5,392,943	+				+2.9
5,392,997	+		PS417_24865	0.31	-2.8
5,392,997	+		PS417_24865	0.31	+2.4
5,392,998	-		PS417_24865	0.31	+0.2
5,393,016	-				+2.8
5,393,125	-		PS417_24865	0.43	-0.3
5,393,205	+		PS417_24865	0.51	+0.2
5,393,397	-		PS417_24865	0.70	-0.1
5,393,442	-		PS417_24865	0.74	-2.1
5,393,637	+				-0.3
5,393,714	+				+0.2
5,393,814	+				-1.9
5,393,830	-				+0.8
5,393,831	+				-0.5
5,393,832	-				+0.6
5,393,944	+				-1.7
5,393,945	-				-1.6
5,393,945	-				+0.7
5,393,969	+				-0.1
5,394,152	+				-1.1
5,394,153	-				+0.6
5,394,182	+				-0.7
5,394,183	-				-1.1
5,394,183	-				+0.6
5,394,207	+				-1.9
5,394,207	+				-2.3
5,394,207	+				+0.7
5,394,207	+				-0.7
5,394,208	-				-0.6
5,394,225	+				-0.2
5,394,226	-				-1.7
5,394,261	+				-1.3
5,394,261	+				+1.2
5,394,261	+				-0.8
5,394,328	-				+1.1
5,394,333	+				+1.1
5,394,350	-				+0.0
5,394,350	-				-0.2
5,394,429	+				+0.5
5,394,587	-				-0.0
5,394,587	-				-0.8
5,394,611	+				+2.1
5,394,611	+				+0.4
5,394,612	-				+0.9
5,394,612	-				+0.8
5,394,618	+				-0.5
5,394,618	+				-1.7
5,394,619	-				+0.7
5,394,623	+				+0.4
5,394,623	+				+1.7
5,394,624	-				+2.5
5,394,632	-				+0.6
5,394,701	-				+0.2
5,394,708	+				-1.6