Strain Fitness in Pseudomonas simiae WCS417 around PS417_24545

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,323,977	+		PS417_24540	0.17	+0.2
5,323,977	+		PS417_24540	0.17	+0.7
5,323,978	-		PS417_24540	0.17	+1.5
5,324,008	-		PS417_24540	0.20	+0.5
5,324,397	+		PS417_24540	0.56	+0.5
5,324,513	+		PS417_24540	0.66	-1.7
5,324,613	+		PS417_24540	0.75	+0.3
5,324,769	+		PS417_24540	0.90	-0.4
5,324,770	-		PS417_24540	0.90	-0.5
5,324,816	+				-1.9
5,324,817	-				+0.1
5,324,817	-				+1.2
5,324,821	+				+0.2
5,324,822	-				-0.1
5,324,822	-				+2.1
5,324,825	+				+0.5
5,324,877	+				+1.5
5,324,877	+				-0.3
5,324,878	-				-1.2
5,324,900	-				-0.8
5,325,069	+		PS417_24545	0.23	-0.1
5,325,069	+		PS417_24545	0.23	-0.4
5,325,069	+		PS417_24545	0.23	+0.8
5,325,069	+		PS417_24545	0.23	+1.8
5,325,070	-		PS417_24545	0.23	-1.3
5,325,070	-		PS417_24545	0.23	-0.4
5,325,070	-		PS417_24545	0.23	+0.9
5,325,088	+		PS417_24545	0.25	-1.4
5,325,139	+		PS417_24545	0.32	+0.5
5,325,211	+		PS417_24545	0.42	+1.1
5,325,211	+		PS417_24545	0.42	+0.5
5,325,211	+		PS417_24545	0.42	-1.9
5,325,211	+		PS417_24545	0.42	+0.4
5,325,211	+		PS417_24545	0.42	-1.4
5,325,211	+		PS417_24545	0.42	-0.5
5,325,211	+		PS417_24545	0.42	-0.7
5,325,212	-		PS417_24545	0.42	-0.1
5,325,212	-		PS417_24545	0.42	+2.8
5,325,212	-		PS417_24545	0.42	+0.0
5,325,212	-		PS417_24545	0.42	+0.1
5,325,212	-		PS417_24545	0.42	-1.5
5,325,212	-		PS417_24545	0.42	+0.7
5,325,212	-		PS417_24545	0.42	-0.9
5,325,212	-		PS417_24545	0.42	+1.0
5,325,215	-		PS417_24545	0.42	+0.0
5,325,248	+		PS417_24545	0.46	+0.5
5,325,278	-		PS417_24545	0.50	-2.0
5,325,299	+		PS417_24545	0.53	-2.6
5,325,299	+		PS417_24545	0.53	-0.1
5,325,303	+		PS417_24545	0.54	+0.1
5,325,303	+		PS417_24545	0.54	+1.2
5,325,303	+		PS417_24545	0.54	+0.2
5,325,304	-		PS417_24545	0.54	-2.9
5,325,304	-		PS417_24545	0.54	-1.6
5,325,304	-		PS417_24545	0.54	+0.9
5,325,304	-		PS417_24545	0.54	+2.3
5,325,304	-		PS417_24545	0.54	-1.5
5,325,304	-		PS417_24545	0.54	+0.5
5,325,304	-		PS417_24545	0.54	+0.6
5,325,304	-		PS417_24545	0.54	-1.9
5,325,496	+		PS417_24545	0.79	+2.1
5,325,497	-		PS417_24545	0.80	-0.1
5,325,497	-		PS417_24545	0.80	-0.3
5,325,497	-		PS417_24545	0.80	+1.2
5,325,655	-				-0.5
5,325,658	+				-0.1
5,325,659	-				+0.5
5,325,673	+				+1.7
5,325,722	-				+1.3
5,325,744	-				-1.5
5,325,744	-				-1.8
5,325,744	-				-1.9
5,325,764	-				+0.2
5,325,764	-				-0.5
5,325,883	+				+1.4
5,325,884	-				-0.5
5,326,059	+				+0.6
5,326,060	-				+1.0
5,326,060	-				-1.4
5,326,060	-				+2.2
5,326,171	-				-0.2
5,326,171	-				-0.1
5,326,175	-				-0.1
5,326,175	-				-0.5
5,326,447	+		PS417_24550	0.15	-0.3