Strain Fitness in Pseudomonas simiae WCS417 around PS417_24400

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,295,812	+		PS417_24395	0.31	-0.3
5,295,813	-		PS417_24395	0.31	-2.3
5,295,813	-		PS417_24395	0.31	-1.8
5,296,052	-		PS417_24395	0.49	+1.0
5,296,062	-		PS417_24395	0.49	-1.8
5,296,101	-		PS417_24395	0.52	-1.1
5,296,101	-		PS417_24395	0.52	-0.2
5,296,401	-		PS417_24395	0.75	-0.9
5,296,662	-				+1.8
5,296,692	+				-0.8
5,296,693	-				-0.8
5,296,885	-				-0.4
5,296,919	+		PS417_24400	0.11	+1.0
5,297,136	+		PS417_24400	0.23	+0.5
5,297,136	+		PS417_24400	0.23	+0.3
5,297,137	-		PS417_24400	0.24	-0.5
5,298,175	+		PS417_24400	0.83	+1.5
5,298,334	+				+0.1
5,298,334	+				+0.8
5,298,335	-				-0.2
5,298,349	+				-0.8
5,298,350	-				+0.0
5,298,350	-				-1.5
5,298,350	-				-0.4
5,298,419	+				+2.3
5,298,421	+				+2.4
5,298,421	+				-0.4
5,298,422	-				-0.5
5,298,422	-				+0.3
5,298,556	-				-1.1
5,298,580	-				-1.6
5,298,580	-				-0.9
5,298,835	+		PS417_24405	0.33	-0.2
5,298,850	-		PS417_24405	0.36	-0.9
5,298,850	-		PS417_24405	0.36	-0.5
5,298,928	+		PS417_24405	0.48	+0.1
5,298,998	+		PS417_24405	0.60	-1.2
5,298,998	+		PS417_24405	0.60	-0.3
5,299,024	+				-0.2
5,299,025	-		PS417_24405	0.64	+1.1
5,299,025	-		PS417_24405	0.64	+0.4
5,299,025	-		PS417_24405	0.64	-0.7
5,299,172	-		PS417_24405	0.88	-0.1
5,299,236	-				+0.2
5,299,411	+				+1.9
5,299,411	+				+2.0