Strain Fitness in Pseudomonas simiae WCS417 around PS417_24335

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,280,709	-				+0.1
5,280,724	-				-0.7
5,280,724	-				-0.9
5,280,724	-				+1.1
5,280,753	-				-0.2
5,280,764	+				+0.5
5,280,765	-				-1.0
5,280,765	-				-0.4
5,280,765	-				-0.7
5,280,807	+				-2.9
5,280,807	+				-0.2
5,280,808	-				-0.5
5,280,808	-				-0.3
5,280,919	+		PS417_24330	0.12	-2.1
5,280,937	+		PS417_24330	0.15	-2.4
5,281,004	-		PS417_24330	0.24	+0.6
5,281,004	-		PS417_24330	0.24	-1.8
5,281,027	+		PS417_24330	0.27	-0.3
5,281,028	-		PS417_24330	0.28	+0.2
5,281,052	+		PS417_24330	0.31	+0.5
5,281,052	+		PS417_24330	0.31	-1.2
5,281,052	+		PS417_24330	0.31	+4.3
5,281,053	-		PS417_24330	0.31	+0.6
5,281,053	-		PS417_24330	0.31	+0.4
5,281,053	-		PS417_24330	0.31	-0.3
5,281,259	-		PS417_24330	0.60	+0.3
5,281,277	+		PS417_24330	0.63	-0.6
5,281,278	-		PS417_24330	0.63	+0.3
5,281,298	+		PS417_24330	0.66	-2.7
5,281,322	-		PS417_24330	0.69	-1.8
5,281,343	+		PS417_24330	0.72	+1.1
5,281,343	+		PS417_24330	0.72	-0.5
5,281,344	-		PS417_24330	0.72	+0.7
5,281,344	-		PS417_24330	0.72	-1.1
5,281,418	+		PS417_24330	0.82	+0.4
5,281,461	+		PS417_24330	0.88	+0.0
5,281,461	+		PS417_24330	0.88	-0.7
5,281,462	-		PS417_24330	0.89	-0.3
5,281,462	-		PS417_24330	0.89	-1.8
5,281,680	+				+0.4
5,281,759	+				+2.4
5,281,760	-				-0.5
5,281,905	+		PS417_24335	0.18	+1.8
5,282,177	+		PS417_24335	0.42	-1.2
5,282,177	+		PS417_24335	0.42	+1.7
5,282,280	-		PS417_24335	0.52	-1.2
5,282,471	+		PS417_24335	0.69	+1.3
5,282,471	+		PS417_24335	0.69	+1.0
5,282,471	+		PS417_24335	0.69	-1.6
5,282,471	+		PS417_24335	0.69	+1.7
5,282,472	-		PS417_24335	0.69	+1.4
5,282,472	-		PS417_24335	0.69	+0.3
5,282,481	+		PS417_24335	0.69	-0.6
5,282,481	+		PS417_24335	0.69	+0.9
5,282,481	+		PS417_24335	0.69	+1.9
5,282,482	-		PS417_24335	0.70	+1.8
5,282,492	+		PS417_24335	0.70	-1.2
5,282,492	+		PS417_24335	0.70	+1.0
5,282,492	+		PS417_24335	0.70	+3.8
5,282,711	+		PS417_24335	0.90	+0.1
5,282,711	+		PS417_24335	0.90	+0.7
5,282,711	+		PS417_24335	0.90	+0.6
5,282,712	-				+1.9
5,282,712	-				+2.1
5,282,713	+				+1.9
5,282,713	+				-0.0
5,282,713	+				+1.2
5,282,714	-				-0.4
5,282,714	-				+2.5
5,282,714	-				-1.3
5,282,714	-				-0.3
5,282,714	-				+1.4
5,282,715	+				+1.6
5,282,715	+				+0.8
5,282,716	-				+0.4
5,283,114	+				+1.3
5,283,117	+				-0.1
5,283,267	+		PS417_24345	0.19	-0.1
5,283,310	-		PS417_24345	0.24	+0.9
5,283,345	+		PS417_24345	0.27	-0.4
5,283,345	+		PS417_24345	0.27	-0.6
5,283,346	-		PS417_24345	0.27	+0.6