Strain Fitness in Pseudomonas simiae WCS417 around PS417_23910

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
5,173,762	+				+0.3
5,174,398	+				-1.5
5,174,398	+				-1.6
5,174,399	-				+0.6
5,174,400	+				+1.1
5,174,450	+				+0.0
5,174,450	+				-0.4
5,174,450	+				-1.3
5,174,451	-				+1.0
5,174,451	-				+2.4
5,174,451	-				+0.8
5,174,452	+				-0.7
5,174,453	-				+1.8
5,174,453	-				+1.0
5,174,453	-				+2.4
5,174,453	-				+1.5
5,174,453	-				+1.7
5,174,481	+				+0.5
5,174,483	+				+0.5
5,174,997	+		PS417_23910	0.57	+0.8
5,174,997	+		PS417_23910	0.57	+1.7
5,174,997	+		PS417_23910	0.57	+1.0
5,174,997	+		PS417_23910	0.57	+1.8
5,174,998	-		PS417_23910	0.57	+6.7
5,174,998	-		PS417_23910	0.57	+4.8
5,174,998	-		PS417_23910	0.57	+6.3
5,174,998	-		PS417_23910	0.57	+4.6
5,175,115	+		PS417_23910	0.71	+1.2
5,175,183	+		PS417_23910	0.80	+3.7
5,175,284	+				+0.9
5,175,550	+		PS417_23915	0.25	+6.3
5,175,634	+		PS417_23915	0.35	+6.2
5,175,797	-		PS417_23915	0.54	+6.4
5,175,872	+		PS417_23915	0.62	+6.6
5,176,223	+				+3.8
5,176,276	+				-0.1
5,176,276	+				-1.5
5,176,288	-				-1.2
5,176,288	-				-0.4
5,176,298	+				-1.6