Strain Fitness in Pseudomonas simiae WCS417 around PS417_22995

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,978,109	+		PS417_22990	0.19	-2.3
4,978,110	-		PS417_22990	0.19	-0.8
4,978,667	-		PS417_22990	0.73	-0.1
4,978,852	+				+0.3
4,978,853	-				+3.7
4,978,974	+				+0.1
4,978,974	+				-0.7
4,978,975	-				-1.4
4,979,078	+				-0.0
4,979,078	+				+0.3
4,979,079	-				+0.5
4,979,079	-				+1.7
4,979,079	-				+0.3
4,979,109	+				+2.4
4,979,659	+		PS417_22995	0.28	-0.9
4,979,933	-		PS417_22995	0.38	-0.7
4,979,951	+		PS417_22995	0.39	-0.4
4,979,952	-		PS417_22995	0.39	+0.1
4,980,941	-				+0.4
4,980,941	-		PS417_22995	0.79	+0.3
4,981,135	-		PS417_22995	0.86	+0.6
4,981,262	-				-1.1
4,981,510	-				+0.3
4,981,510	-				-0.0
4,981,845	+		PS417_23000	0.20	-0.9
4,981,991	+		PS417_23000	0.28	+0.0
4,981,991	+		PS417_23000	0.28	-0.1
4,982,097	-		PS417_23000	0.35	+0.2
4,982,110	+		PS417_23000	0.35	+0.7
4,982,111	-		PS417_23000	0.35	-1.2
4,982,170	-		PS417_23000	0.39	-0.6
4,982,435	+		PS417_23000	0.54	-0.9
4,982,435	+		PS417_23000	0.54	-2.0
4,982,435	+		PS417_23000	0.54	-1.9
4,982,436	-		PS417_23000	0.54	-0.9
4,982,436	-		PS417_23000	0.54	-0.6
4,982,436	-		PS417_23000	0.54	-1.3
4,982,460	-		PS417_23000	0.56	-0.9