Strain Fitness in Pseudomonas simiae WCS417 around PS417_22585

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,889,299	+				-0.2
4,889,299	+				-2.1
4,889,299	+				+0.1
4,889,366	+				-1.7
4,889,397	-				-2.1
4,889,778	+		PS417_22580	0.32	+0.0
4,889,778	+		PS417_22580	0.32	+0.7
4,889,779	-		PS417_22580	0.32	-1.5
4,889,779	-		PS417_22580	0.32	-2.3
4,890,042	-		PS417_22580	0.70	-2.5
4,890,042	-		PS417_22580	0.70	+0.5
4,890,422	+		PS417_22585	0.18	-0.7
4,890,422	+		PS417_22585	0.18	+1.3
4,890,473	+		PS417_22585	0.23	-0.0
4,890,516	+		PS417_22585	0.27	-0.7
4,890,517	-		PS417_22585	0.27	-2.8
4,890,617	+		PS417_22585	0.38	-1.1
4,890,618	-		PS417_22585	0.38	-0.7
4,890,639	-		PS417_22585	0.40	-3.2
4,890,683	+		PS417_22585	0.44	-1.4
4,890,683	+		PS417_22585	0.44	-2.6
4,890,683	+		PS417_22585	0.44	+1.3
4,890,683	+		PS417_22585	0.44	-1.7
4,890,683	+		PS417_22585	0.44	+0.7
4,890,684	-		PS417_22585	0.44	-0.1
4,890,684	-				+0.9
4,890,756	-		PS417_22585	0.52	+0.2
4,890,756	-		PS417_22585	0.52	-1.3
4,890,758	+		PS417_22585	0.52	-1.1
4,890,758	+		PS417_22585	0.52	+1.8
4,890,758	+		PS417_22585	0.52	-0.6
4,890,759	-		PS417_22585	0.52	+2.1
4,890,759	-		PS417_22585	0.52	-0.1
4,891,077	+		PS417_22585	0.85	+0.3
4,891,078	-		PS417_22585	0.85	+0.8
4,891,109	+		PS417_22585	0.88	-1.1
4,891,109	+		PS417_22585	0.88	-2.4
4,891,110	-		PS417_22585	0.88	-1.5
4,891,110	-		PS417_22585	0.88	-1.1
4,891,110	-		PS417_22585	0.88	-1.1
4,891,148	+				+0.6
4,891,149	-				-0.9
4,891,187	+				+0.3
4,891,188	-				-1.1
4,891,253	+				+0.4
4,891,440	+		PS417_22590	0.15	-0.7
4,891,440	+		PS417_22590	0.15	+0.1
4,891,440	+		PS417_22590	0.15	+1.4
4,891,440	+		PS417_22590	0.15	-2.8
4,891,440	+		PS417_22590	0.15	-1.9
4,891,440	+		PS417_22590	0.15	+1.2
4,891,440	+		PS417_22590	0.15	-0.7
4,891,440	+		PS417_22590	0.15	-1.7
4,891,441	-		PS417_22590	0.15	-1.1
4,891,441	-		PS417_22590	0.15	+0.8
4,891,443	-		PS417_22590	0.15	-1.6
4,891,459	+		PS417_22590	0.16	+0.8
4,891,732	+		PS417_22590	0.34	+0.2
4,891,732	+		PS417_22590	0.34	-1.0
4,891,732	+		PS417_22590	0.34	-0.3
4,891,732	+		PS417_22590	0.34	-1.6
4,891,733	-		PS417_22590	0.34	-1.3
4,891,737	-		PS417_22590	0.34	-0.8
4,891,834	-		PS417_22590	0.40	+0.5
4,891,862	+		PS417_22590	0.42	+1.7
4,891,862	+				+2.0
4,891,862	+		PS417_22590	0.42	-0.6
4,891,863	-		PS417_22590	0.42	-0.1
4,891,863	-		PS417_22590	0.42	+0.1
4,891,863	-		PS417_22590	0.42	+0.6
4,891,863	-		PS417_22590	0.42	+0.1
4,891,866	+		PS417_22590	0.43	-2.3
4,891,866	+		PS417_22590	0.43	+0.6
4,891,866	+		PS417_22590	0.43	-0.1
4,891,866	+		PS417_22590	0.43	-1.4
4,891,867	-		PS417_22590	0.43	+2.6
4,891,867	-		PS417_22590	0.43	-0.9
4,891,867	-		PS417_22590	0.43	+2.0
4,891,867	-		PS417_22590	0.43	+0.2
4,891,867	-		PS417_22590	0.43	-0.5
4,891,867	-		PS417_22590	0.43	-1.0
4,891,867	-		PS417_22590	0.43	+1.7
4,891,909	+		PS417_22590	0.45	+1.1
4,891,910	-		PS417_22590	0.45	+0.6
4,891,910	-		PS417_22590	0.45	-0.6
4,891,982	-		PS417_22590	0.50	-0.1