Strain Fitness in Pseudomonas simiae WCS417 around PS417_22500

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,868,988	+				-1.2
4,868,989	-				+0.5
4,869,364	+				-1.4
4,869,365	-				+1.0
4,869,418	+				+0.7
4,869,615	-				-0.5
4,869,718	+				-0.6
4,869,794	-				-1.9
4,869,794	-				-2.3
4,869,936	+				+0.4
4,870,005	+				+1.5
4,870,005	+				-0.0
4,870,005	+				+0.5
4,870,006	-				-2.3
4,870,009	-				-1.9
4,870,108	+		PS417_22500	0.17	+1.2
4,870,249	+		PS417_22500	0.28	+0.7
4,870,250	-		PS417_22500	0.28	-0.4
4,870,250	-		PS417_22500	0.28	+0.1
4,870,250	-		PS417_22500	0.28	+0.1
4,870,315	+		PS417_22500	0.33	+0.5
4,870,332	-		PS417_22500	0.34	+0.6
4,870,459	+		PS417_22500	0.44	+0.8
4,870,460	-		PS417_22500	0.44	-0.1
4,870,460	-		PS417_22500	0.44	-0.4
4,870,507	+		PS417_22500	0.48	-0.3
4,870,507	+		PS417_22500	0.48	-0.1
4,870,508	-		PS417_22500	0.48	+0.5
4,870,544	-		PS417_22500	0.51	-1.5
4,870,570	-		PS417_22500	0.53	-0.6
4,870,573	+		PS417_22500	0.53	-0.1
4,870,573	+				+1.0
4,870,573	+		PS417_22500	0.53	-0.4
4,870,573	+		PS417_22500	0.53	+1.0
4,870,574	-		PS417_22500	0.53	-0.8
4,870,574	-		PS417_22500	0.53	+0.1
4,870,576	+		PS417_22500	0.53	-0.5
4,870,642	+		PS417_22500	0.58	-0.3
4,870,642	+		PS417_22500	0.58	-1.5
4,870,642	+		PS417_22500	0.58	-2.2
4,870,642	+		PS417_22500	0.58	-0.1
4,870,642	+		PS417_22500	0.58	-1.0
4,870,642	+		PS417_22500	0.58	-0.4
4,870,643	-		PS417_22500	0.58	-0.7
4,870,681	+		PS417_22500	0.61	+1.7
4,870,681	+		PS417_22500	0.61	+1.6
4,870,681	+		PS417_22500	0.61	+0.1
4,870,682	-		PS417_22500	0.61	-2.2
4,870,682	-		PS417_22500	0.61	+1.5
4,870,682	-		PS417_22500	0.61	+0.5
4,870,682	-		PS417_22500	0.61	+1.0
4,871,041	+		PS417_22500	0.89	-1.7
4,871,041	+		PS417_22500	0.89	+0.7
4,871,042	-		PS417_22500	0.89	+2.6
4,871,042	-		PS417_22500	0.89	+0.2
4,871,042	-		PS417_22500	0.89	+0.4
4,871,084	+				+1.6
4,871,084	+				-0.0
4,871,084	+				+2.0
4,871,085	-				+0.8
4,871,098	+				+3.6
4,871,099	-				+0.3
4,871,099	-				+1.5
4,871,099	-				-0.3
4,871,119	+				+0.5
4,871,119	+				+0.3
4,871,165	-				-0.2
4,871,182	+				+1.5
4,871,182	+				-0.1
4,871,183	-				+0.6
4,871,195	+				+0.6
4,871,195	+				+0.8
4,871,211	+				+1.2
4,871,212	-				+0.7
4,871,212	-				-1.1
4,871,212	-				-1.1
4,871,300	-				-2.0
4,871,307	+				+2.0
4,871,308	-				+0.2
4,871,308	-				+1.3
4,871,367	+				-0.1
4,871,367	+				-0.0
4,871,368	-				+3.5
4,871,377	+				+0.9
4,871,377	+				-0.9
4,871,408	+				-1.3
4,871,409	-				+0.7
4,871,430	-				+1.7
4,871,430	-				+0.2
4,871,484	+		PS417_22505	0.13	+3.0
4,871,485	-		PS417_22505	0.13	-0.7
4,871,485	-		PS417_22505	0.13	+0.7
4,872,020	+		PS417_22505	0.76	+0.3
4,872,050	+		PS417_22505	0.80	+1.1
4,872,087	+		PS417_22505	0.84	-0.7
4,872,087	+				+0.5
4,872,088	-		PS417_22505	0.84	+1.5
4,872,088	-		PS417_22505	0.84	+0.3