Strain Fitness in Pseudomonas simiae WCS417 around PS417_21030

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,573,660	+				-0.5
4,573,687	+				-0.0
4,573,793	+		PS417_21025	0.11	+1.1
4,573,818	+		PS417_21025	0.14	+0.0
4,574,022	+		PS417_21025	0.39	+0.1
4,574,064	+		PS417_21025	0.44	-1.8
4,574,064	+		PS417_21025	0.44	+2.2
4,574,064	+		PS417_21025	0.44	-1.2
4,574,064	+		PS417_21025	0.44	-1.3
4,574,064	+		PS417_21025	0.44	-2.3
4,574,064	+		PS417_21025	0.44	-0.2
4,574,066	+		PS417_21025	0.44	+0.2
4,574,066	+		PS417_21025	0.44	+0.6
4,574,193	+		PS417_21025	0.60	-1.3
4,574,193	+		PS417_21025	0.60	-0.4
4,574,194	-		PS417_21025	0.60	-1.9
4,574,229	+		PS417_21025	0.64	+1.8
4,574,510	+				-0.7
4,574,520	+				-2.3
4,574,520	+				+3.8
4,574,520	+				-0.6
4,574,577	-				-0.3
4,574,638	+				-0.3
4,574,640	+				+1.4
4,574,641	-				-1.3
4,574,724	-				+0.1
4,574,800	+		PS417_21030	0.11	+0.0
4,574,804	+		PS417_21030	0.12	+0.1
4,574,805	-		PS417_21030	0.12	-0.9
4,574,805	-		PS417_21030	0.12	-0.2
4,575,091	+		PS417_21030	0.32	-2.4
4,575,092	-		PS417_21030	0.32	-2.5
4,575,092	-		PS417_21030	0.32	-0.1
4,575,196	-				+2.9
4,575,196	-		PS417_21030	0.39	+0.7
4,575,316	+		PS417_21030	0.48	-0.3
4,575,467	+		PS417_21030	0.58	-0.9
4,575,622	+		PS417_21030	0.69	-0.2
4,575,623	-		PS417_21030	0.69	-2.5
4,575,623	-		PS417_21030	0.69	+0.0
4,575,713	+		PS417_21030	0.76	-2.7
4,575,733	+		PS417_21030	0.77	-0.3
4,575,734	-		PS417_21030	0.77	+1.3
4,575,734	-		PS417_21030	0.77	-1.2
4,575,989	-				-2.1
4,576,026	-				-1.1
4,576,044	-				-1.1
4,576,074	+				-0.4
4,576,074	+				-0.1
4,576,074	+				+0.7
4,576,130	+				-0.3
4,576,131	-				-0.0
4,576,448	-		PS417_21035	0.29	-0.5
4,576,465	+				-0.7
4,576,465	+		PS417_21035	0.31	+1.1
4,576,465	+		PS417_21035	0.31	+1.0
4,576,465	+		PS417_21035	0.31	-0.1
4,576,466	-		PS417_21035	0.31	-1.3
4,576,478	-		PS417_21035	0.32	-0.7
4,576,579	+		PS417_21035	0.43	+0.0
4,576,580	-		PS417_21035	0.43	-2.1
4,576,580	-		PS417_21035	0.43	-0.1
4,576,625	-		PS417_21035	0.48	+1.1
4,576,720	+		PS417_21035	0.58	+1.1
4,576,721	-		PS417_21035	0.58	+0.6
4,576,721	-		PS417_21035	0.58	-0.5
4,576,721	-		PS417_21035	0.58	-1.8
4,576,728	+		PS417_21035	0.59	+0.2
4,576,728	+		PS417_21035	0.59	-1.0
4,576,728	+		PS417_21035	0.59	+0.2
4,576,765	+		PS417_21035	0.63	-1.2
4,576,765	+		PS417_21035	0.63	+1.6
4,576,915	+		PS417_21035	0.79	-0.3
4,576,916	-		PS417_21035	0.79	-0.2
4,576,916	-		PS417_21035	0.79	+0.5