Strain Fitness in Pseudomonas simiae WCS417 around PS417_20955

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,557,218	-				+2.6
4,557,225	-				+0.4
4,557,262	+				+1.0
4,557,350	+		PS417_20945	0.22	+0.2
4,557,351	-		PS417_20945	0.23	-1.5
4,557,351	-		PS417_20945	0.23	+1.2
4,557,406	+		PS417_20945	0.37	-2.6
4,557,407	-		PS417_20945	0.37	-0.9
4,557,407	-		PS417_20945	0.37	+1.0
4,557,422	-		PS417_20945	0.41	+2.7
4,557,546	-		PS417_20945	0.72	+0.4
4,557,552	+		PS417_20945	0.73	-0.5
4,557,677	-				-0.1
4,557,730	+				+0.5
4,557,732	+				-1.1
4,557,800	+				-0.7
4,557,800	+				+0.1
4,557,844	-		PS417_20950	0.14	+0.7
4,557,879	-		PS417_20950	0.30	+3.0
4,557,879	-		PS417_20950	0.30	-0.2
4,557,879	-		PS417_20950	0.30	-1.0
4,557,879	-		PS417_20950	0.30	+2.0
4,558,016	+				-0.3
4,558,017	-				+1.0
4,558,105	-				-2.1
4,558,105	-				-0.3
4,558,483	+		PS417_20955	0.30	+0.3
4,558,483	+		PS417_20955	0.30	-2.0
4,558,484	-		PS417_20955	0.30	+0.1
4,558,544	+		PS417_20955	0.34	+0.9
4,558,588	+		PS417_20955	0.37	+0.0
4,558,589	-		PS417_20955	0.37	+0.3
4,558,934	+		PS417_20955	0.61	-0.7
4,558,935	-		PS417_20955	0.61	-2.4
4,558,935	-				-0.7
4,559,043	+		PS417_20955	0.68	-0.8
4,559,044	-		PS417_20955	0.68	+0.1
4,559,064	+		PS417_20955	0.70	+0.2
4,559,064	+		PS417_20955	0.70	+0.2
4,559,064	+		PS417_20955	0.70	-0.4
4,559,064	+		PS417_20955	0.70	+0.7
4,559,065	-		PS417_20955	0.70	+1.1
4,559,065	-		PS417_20955	0.70	-1.0
4,559,065	-		PS417_20955	0.70	+0.3
4,559,065	-		PS417_20955	0.70	+0.9
4,559,199	+		PS417_20955	0.79	+0.3
4,559,200	-		PS417_20955	0.79	+0.7
4,559,200	-		PS417_20955	0.79	-0.9
4,559,205	+		PS417_20955	0.79	-1.7
4,559,206	-				+0.7
4,559,206	-		PS417_20955	0.79	+0.0
4,559,206	-		PS417_20955	0.79	-1.3
4,559,206	-		PS417_20955	0.79	-0.6
4,559,226	+		PS417_20955	0.81	-2.3
4,559,226	+		PS417_20955	0.81	+0.4
4,559,227	-		PS417_20955	0.81	-0.2
4,559,376	+				-0.7
4,559,401	-				-0.6
4,559,627	-				-0.7
4,559,637	+				+1.7
4,559,638	-				-0.3
4,559,746	+				+0.1
4,559,911	+		PS417_20960	0.13	-0.3
4,560,016	+		PS417_20960	0.21	+0.6
4,560,017	-				-1.3
4,560,229	+		PS417_20960	0.39	-3.2
4,560,229	+				-0.7
4,560,229	+		PS417_20960	0.39	+0.2
4,560,229	+		PS417_20960	0.39	-1.3
4,560,230	-		PS417_20960	0.39	-0.1
4,560,230	-		PS417_20960	0.39	+0.4
4,560,230	-		PS417_20960	0.39	+1.3
4,560,230	-		PS417_20960	0.39	+1.7
4,560,233	-		PS417_20960	0.39	+0.6