Strain Fitness in Pseudomonas simiae WCS417 around PS417_20935

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,554,752	-				-1.3
4,554,752	-				-2.6
4,554,866	+				+1.1
4,554,882	-				-0.3
4,554,882	-				-1.5
4,554,890	-				+0.3
4,554,970	-				-0.6
4,554,998	+				+1.3
4,554,998	+				+1.9
4,554,999	-				+0.8
4,555,050	+				+2.3
4,555,050	+				+1.6
4,555,051	-				-0.6
4,555,051	-				+0.2
4,555,051	-				+1.9
4,555,051	-				+0.3
4,555,074	-				-0.8
4,555,105	+				-0.8
4,555,106	-				-1.2
4,555,106	-				+0.6
4,555,260	-				+1.4
4,555,271	+				-0.3
4,555,272	-				+0.3
4,555,272	-				+0.0
4,555,272	-				+0.3
4,555,352	+				-0.7
4,555,353	-				-4.0
4,555,487	+				+0.0
4,555,487	+				-0.4
4,555,488	-				-1.8
4,555,488	-				-0.6
4,555,513	-				-1.0
4,555,516	+				-0.9
4,555,517	-				-0.5
4,555,525	-				-0.5
4,555,525	-				+1.6
4,555,525	-				+0.6
4,555,648	+				+0.2
4,555,649	-				+1.2
4,555,690	+				+2.5
4,555,690	+				-0.8
4,555,691	-				-0.0
4,556,719	-				-1.3
4,556,764	-				-1.9
4,556,836	-				+1.2
4,556,836	-				+1.3
4,556,839	-				+0.8
4,556,859	+		PS417_20940	0.11	-2.4
4,556,860	-		PS417_20940	0.11	-2.9
4,556,910	+		PS417_20940	0.22	+0.6
4,556,911	-		PS417_20940	0.23	+0.4
4,556,911	-		PS417_20940	0.23	+0.6
4,557,022	+		PS417_20940	0.47	-1.8
4,557,022	+		PS417_20940	0.47	-0.0
4,557,023	-		PS417_20940	0.47	-1.5
4,557,218	-				+2.6
4,557,225	-				+0.4
4,557,262	+				+1.0
4,557,350	+		PS417_20945	0.22	+0.2
4,557,351	-		PS417_20945	0.23	-1.5
4,557,351	-		PS417_20945	0.23	+1.2
4,557,406	+		PS417_20945	0.37	-2.6
4,557,407	-		PS417_20945	0.37	-0.9
4,557,407	-		PS417_20945	0.37	+1.0
4,557,422	-		PS417_20945	0.41	+2.7
4,557,546	-		PS417_20945	0.72	+0.4
4,557,552	+		PS417_20945	0.73	-0.5
4,557,677	-				-0.1