Strain Fitness in Pseudomonas simiae WCS417 around PS417_20930

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,551,540	+				+0.3
4,551,540	+		PS417_20925	0.70	-0.7
4,551,541	-				+0.9
4,551,562	+		PS417_20925	0.71	-1.4
4,551,640	+		PS417_20925	0.74	-0.4
4,551,640	+		PS417_20925	0.74	+3.3
4,551,787	+		PS417_20925	0.80	-2.3
4,551,787	+		PS417_20925	0.80	-0.6
4,551,787	+		PS417_20925	0.80	-0.0
4,551,788	-		PS417_20925	0.80	+1.3
4,551,798	+		PS417_20925	0.81	-1.5
4,551,799	-		PS417_20925	0.81	-0.7
4,551,802	+		PS417_20925	0.81	-1.2
4,551,803	-		PS417_20925	0.81	+0.2
4,551,803	-		PS417_20925	0.81	+0.1
4,551,803	-		PS417_20925	0.81	+0.6
4,551,885	+		PS417_20925	0.84	-0.4
4,551,886	-		PS417_20925	0.84	-1.2
4,551,920	-		PS417_20925	0.86	+1.3
4,551,940	+		PS417_20925	0.87	+0.8
4,551,941	-		PS417_20925	0.87	+0.2
4,551,941	-		PS417_20925	0.87	+0.9
4,552,078	+				+1.7
4,552,166	+				-2.8
4,552,189	-				-0.2
4,552,223	+				-1.3
4,552,262	+				+0.6
4,552,262	+				+0.7
4,552,313	+				+0.2
4,552,313	+				-0.6
4,552,318	+				+0.4
4,552,318	+				+3.3
4,552,318	+				-0.4
4,552,319	-				+0.1
4,552,319	-				-0.8
4,552,321	-				+1.2
4,552,336	-				-0.8
4,552,336	-				+0.6
4,552,358	+				-0.1
4,552,401	-				-0.4
4,552,451	-				-1.0
4,552,845	-		PS417_20930	0.17	+2.0
4,552,919	+		PS417_20930	0.20	+3.3
4,552,920	-		PS417_20930	0.20	+1.5
4,552,926	-		PS417_20930	0.20	+1.9
4,553,258	+		PS417_20930	0.35	+2.1
4,553,280	-		PS417_20930	0.36	+1.1
4,553,300	+		PS417_20930	0.37	+2.3
4,553,300	+		PS417_20930	0.37	+3.2
4,553,301	-		PS417_20930	0.37	+3.6
4,553,344	+		PS417_20930	0.39	+0.9
4,553,729	+		PS417_20930	0.56	+0.3
4,553,735	+		PS417_20930	0.56	+1.5
4,553,735	+		PS417_20930	0.56	+1.3
4,553,735	+				+2.3
4,553,735	+		PS417_20930	0.56	+1.5
4,553,735	+		PS417_20930	0.56	+2.1
4,553,735	+		PS417_20930	0.56	+1.5
4,553,736	-		PS417_20930	0.56	-1.8
4,553,846	+		PS417_20930	0.61	+1.5
4,554,354	+		PS417_20930	0.84	-1.3
4,554,465	+		PS417_20930	0.88	+2.3
4,554,465	+		PS417_20930	0.88	+2.2
4,554,466	-		PS417_20930	0.88	+1.8
4,554,466	-		PS417_20930	0.88	+2.7
4,554,752	-				-1.3
4,554,752	-				-2.6
4,554,866	+				+1.1
4,554,882	-				-0.3
4,554,882	-				-1.5
4,554,890	-				+0.3
4,554,970	-				-0.6
4,554,998	+				+1.3
4,554,998	+				+1.9
4,554,999	-				+0.8
4,555,050	+				+2.3
4,555,050	+				+1.6
4,555,051	-				-0.6
4,555,051	-				+0.2
4,555,051	-				+1.9
4,555,051	-				+0.3
4,555,074	-				-0.8
4,555,105	+				-0.8
4,555,106	-				-1.2
4,555,106	-				+0.6
4,555,260	-				+1.4
4,555,271	+				-0.3
4,555,272	-				+0.3
4,555,272	-				+0.0
4,555,272	-				+0.3
4,555,352	+				-0.7
4,555,353	-				-4.0
4,555,487	+				+0.0
4,555,487	+				-0.4
4,555,488	-				-1.8
4,555,488	-				-0.6
4,555,513	-				-1.0
4,555,516	+				-0.9
4,555,517	-				-0.5
4,555,525	-				-0.5
4,555,525	-				+1.6
4,555,525	-				+0.6
4,555,648	+				+0.2
4,555,649	-				+1.2
4,555,690	+				+2.5
4,555,690	+				-0.8
4,555,691	-				-0.0