Strain Fitness in Pseudomonas simiae WCS417 around PS417_19225

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,169,783	+		PS417_19220	0.87	-0.6
4,169,783	+		PS417_19220	0.87	+0.3
4,169,844	-		PS417_19220	0.88	+0.4
4,169,844	-				+1.7
4,170,038	+				+1.3
4,170,065	+				+0.0
4,170,135	-				+0.5
4,170,224	-				+0.7
4,170,506	+				-0.2
4,170,526	+				-1.7
4,170,690	+				-0.1
4,170,691	-				-0.7
4,170,726	+				-0.2
4,170,895	+		PS417_19225	0.14	-0.2
4,170,903	+		PS417_19225	0.14	+0.5
4,171,867	+		PS417_19225	0.63	-0.8
4,172,100	+		PS417_19225	0.74	-1.4
4,172,100	+		PS417_19225	0.74	-0.4
4,172,101	-		PS417_19225	0.74	+0.1
4,172,101	-		PS417_19225	0.74	-0.9
4,172,310	+		PS417_19225	0.85	+0.1
4,172,361	+		PS417_19225	0.87	-1.1
4,172,362	-		PS417_19225	0.87	-1.5
4,172,375	+		PS417_19225	0.88	+1.3
4,172,427	+				+0.3
4,172,428	-				-1.4
4,172,578	+				+0.8
4,172,645	-				-1.8
4,172,667	-				-0.8
4,172,750	-				+0.8
4,172,760	+				-2.3
4,172,985	-		PS417_19230	0.13	-2.1
4,172,985	-		PS417_19230	0.13	-0.3
4,172,985	-		PS417_19230	0.13	+0.4
4,173,036	-		PS417_19230	0.16	-2.6
4,173,192	-		PS417_19230	0.25	+0.6
4,173,192	-		PS417_19230	0.25	+1.7
4,173,260	-		PS417_19230	0.29	+1.6
4,173,296	+		PS417_19230	0.31	+0.3
4,173,296	+		PS417_19230	0.31	-2.0
4,173,332	-		PS417_19230	0.33	-0.4