Strain Fitness in Pseudomonas simiae WCS417 around PS417_19220

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,164,622	+		PS417_19215	0.45	-1.8
4,164,623	-		PS417_19215	0.45	+0.5
4,164,842	+		PS417_19215	0.60	-2.3
4,165,409	+				+1.6
4,165,409	+				+0.8
4,165,410	-				+0.2
4,165,486	+				+0.3
4,165,582	-				+0.1
4,165,637	-				+0.1
4,165,682	+				-1.8
4,165,682	+				-0.6
4,165,682	+				+0.5
4,165,783	-				+2.3
4,165,783	-				-0.1
4,165,812	+				+1.3
4,166,013	-				+0.0
4,166,463	-		PS417_19220	0.19	+0.4
4,166,694	+		PS417_19220	0.23	-1.5
4,166,694	+		PS417_19220	0.23	-0.8
4,166,694	+		PS417_19220	0.23	+0.8
4,166,799	-		PS417_19220	0.26	-0.2
4,166,936	+		PS417_19220	0.28	-0.0
4,166,937	-		PS417_19220	0.28	-0.2
4,167,050	-		PS417_19220	0.31	-2.4
4,167,245	-		PS417_19220	0.35	-1.8
4,167,326	-		PS417_19220	0.36	+1.9
4,167,326	-		PS417_19220	0.36	-0.6
4,167,599	+				+2.3
4,167,973	-		PS417_19220	0.50	-0.2
4,168,035	-		PS417_19220	0.51	-0.6
4,168,044	-		PS417_19220	0.51	+0.1
4,168,310	+		PS417_19220	0.57	+0.5
4,168,333	+		PS417_19220	0.57	+0.1
4,168,333	+		PS417_19220	0.57	+1.9
4,168,333	+		PS417_19220	0.57	-0.2
4,168,537	+		PS417_19220	0.61	-0.5
4,168,679	+		PS417_19220	0.64	-0.2
4,168,769	+		PS417_19220	0.66	+0.3
4,168,769	+		PS417_19220	0.66	+0.4
4,168,769	+		PS417_19220	0.66	-0.2
4,168,770	-		PS417_19220	0.66	+0.2
4,168,770	-		PS417_19220	0.66	+0.0
4,168,770	-		PS417_19220	0.66	-0.8
4,168,770	-		PS417_19220	0.66	-0.8
4,168,770	-		PS417_19220	0.66	-2.9
4,168,791	-		PS417_19220	0.67	-0.2
4,168,901	+		PS417_19220	0.69	+0.3
4,168,902	-		PS417_19220	0.69	+1.2
4,168,927	-		PS417_19220	0.70	-1.7
4,168,978	+		PS417_19220	0.71	+0.4
4,169,069	+		PS417_19220	0.72	+1.1
4,169,069	+		PS417_19220	0.72	+0.6
4,169,070	-		PS417_19220	0.72	+1.3
4,169,070	-		PS417_19220	0.72	-1.5
4,169,071	+		PS417_19220	0.73	+0.1
4,169,071	+		PS417_19220	0.73	-1.2
4,169,071	+		PS417_19220	0.73	-1.8
4,169,072	-		PS417_19220	0.73	+0.0
4,169,072	-		PS417_19220	0.73	-1.0
4,169,072	-		PS417_19220	0.73	+0.8
4,169,072	-		PS417_19220	0.73	-1.3
4,169,072	-		PS417_19220	0.73	+1.3
4,169,072	-		PS417_19220	0.73	-1.8
4,169,264	+		PS417_19220	0.76	+1.4
4,169,265	-		PS417_19220	0.77	+1.8
4,169,265	-		PS417_19220	0.77	+0.9
4,169,398	-		PS417_19220	0.79	-0.3
4,169,398	-		PS417_19220	0.79	-0.5
4,169,432	+		PS417_19220	0.80	+0.2
4,169,433	-		PS417_19220	0.80	-1.9
4,169,433	-		PS417_19220	0.80	-1.2
4,169,460	-		PS417_19220	0.81	-1.0
4,169,460	-		PS417_19220	0.81	-0.0
4,169,460	-		PS417_19220	0.81	-0.8
4,169,494	-		PS417_19220	0.81	+0.2
4,169,494	-		PS417_19220	0.81	+0.6
4,169,495	+		PS417_19220	0.81	+0.5
4,169,495	+		PS417_19220	0.81	+1.1
4,169,496	-		PS417_19220	0.81	-1.0
4,169,496	-				+3.7
4,169,496	-		PS417_19220	0.81	-0.2
4,169,496	-		PS417_19220	0.81	-0.7
4,169,496	-		PS417_19220	0.81	+1.3
4,169,496	-		PS417_19220	0.81	+1.9
4,169,496	-		PS417_19220	0.81	-0.5
4,169,783	+		PS417_19220	0.87	-0.6
4,169,783	+		PS417_19220	0.87	+0.3
4,169,844	-		PS417_19220	0.88	+0.4
4,169,844	-				+1.7
4,170,038	+				+1.3
4,170,065	+				+0.0
4,170,135	-				+0.5
4,170,224	-				+0.7
4,170,506	+				-0.2
4,170,526	+				-1.7
4,170,690	+				-0.1
4,170,691	-				-0.7
4,170,726	+				-0.2
4,170,895	+		PS417_19225	0.14	-0.2
4,170,903	+		PS417_19225	0.14	+0.5