Strain Fitness in Pseudomonas simiae WCS417 around PS417_18885

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
4,088,602	-				-0.7
4,088,825	+		PS417_18880	0.28	+0.2
4,088,825	+		PS417_18880	0.28	+1.1
4,088,826	-		PS417_18880	0.28	+0.6
4,088,826	-		PS417_18880	0.28	-1.1
4,088,826	-		PS417_18880	0.28	+0.5
4,088,867	+		PS417_18880	0.34	+0.2
4,088,907	+		PS417_18880	0.40	+0.4
4,088,907	+				+0.3
4,088,907	+		PS417_18880	0.40	-1.7
4,088,907	+		PS417_18880	0.40	-1.0
4,088,908	-		PS417_18880	0.40	+0.7
4,088,908	-		PS417_18880	0.40	+0.1
4,089,141	+		PS417_18880	0.74	-0.9
4,089,555	-		PS417_18885	0.33	-1.3
4,089,555	-		PS417_18885	0.33	-0.3
4,089,638	-		PS417_18885	0.44	-1.0
4,090,010	+				+0.0
4,090,232	+				-1.2
4,090,232	+				-1.0
4,090,232	+				-2.8
4,090,232	+				-0.6
4,090,232	+				+1.7
4,090,233	-				-0.9
4,090,233	-				+0.5
4,090,233	-				+1.5
4,090,269	-				+1.3
4,090,359	-				-1.3
4,090,498	-				-1.0
4,090,734	+		PS417_18890	0.26	+0.2
4,090,734	+		PS417_18890	0.26	+0.2
4,090,735	-		PS417_18890	0.26	+0.6
4,090,735	-		PS417_18890	0.26	-1.0
4,090,735	-		PS417_18890	0.26	+0.5
4,090,791	+		PS417_18890	0.30	-0.7
4,090,794	+		PS417_18890	0.30	-0.2