Strain Fitness in Pseudomonas simiae WCS417 around PS417_17680
Experiment: Gentamicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Gentamicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,858,627 | - | PS417_17675 | 0.35 | -2.1 | |
3,859,095 | + | +0.3 | |||
3,859,133 | - | -0.2 | |||
3,859,142 | + | -0.6 | |||
3,859,145 | + | -0.0 | |||
3,859,452 | - | PS417_17680 | 0.48 | +0.1 | |
3,859,452 | - | PS417_17680 | 0.48 | +2.2 | |
3,859,712 | + | PS417_17680 | 0.86 | -1.1 | |
3,859,712 | + | PS417_17680 | 0.86 | -0.5 | |
3,859,830 | - | -0.1 | |||
3,860,039 | + | PS417_17685 | 0.17 | +0.3 | |
3,860,285 | + | PS417_17685 | 0.36 | -0.0 |
Or see this region's nucleotide sequence