Strain Fitness in Pseudomonas simiae WCS417 around PS417_17140

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
3,741,971	-				+0.6
3,741,982	+				-2.0
3,741,982	+				-1.4
3,742,001	-				+0.7
3,742,483	+		PS417_17135	0.45	+2.6
3,742,489	+		PS417_17135	0.46	-0.1
3,742,568	+		PS417_17135	0.55	+0.3
3,742,568	+		PS417_17135	0.55	+3.0
3,742,569	-		PS417_17135	0.55	-0.6
3,742,614	+		PS417_17135	0.60	-1.3
3,742,614	+		PS417_17135	0.60	+0.4
3,742,615	-		PS417_17135	0.60	+1.6
3,743,204	+		PS417_17140	0.30	-0.8
3,743,204	+		PS417_17140	0.30	+1.3
3,743,205	-		PS417_17140	0.30	-0.6
3,743,677	+		PS417_17140	0.85	+0.4
3,743,677	+		PS417_17140	0.85	+0.4
3,743,678	-		PS417_17140	0.85	+1.0
3,743,750	+				-0.7
3,743,824	-				+0.0
3,743,833	-				-2.3
3,743,874	+				-0.5
3,744,608	+		PS417_17145	0.62	-0.3
3,744,608	+		PS417_17145	0.62	-0.8
3,744,608	+		PS417_17145	0.62	-3.2
3,744,609	-		PS417_17145	0.62	+1.0
3,744,609	-		PS417_17145	0.62	-0.0
3,744,654	+		PS417_17145	0.66	-0.4
3,744,654	+		PS417_17145	0.66	+0.7
3,744,655	-		PS417_17145	0.66	-0.2
3,744,719	-		PS417_17145	0.72	+0.7
3,744,726	-		PS417_17145	0.73	-0.6