Strain Fitness in Pseudomonas simiae WCS417 around PS417_15620

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
3,426,664	-		PS417_15615	0.18	+1.0
3,426,891	+		PS417_15615	0.45	-0.9
3,426,892	-		PS417_15615	0.45	-0.9
3,426,900	+		PS417_15615	0.46	+0.2
3,426,900	+		PS417_15615	0.46	+0.2
3,426,900	+		PS417_15615	0.46	-0.4
3,426,900	+		PS417_15615	0.46	-1.8
3,426,901	-		PS417_15615	0.46	+0.7
3,426,901	-		PS417_15615	0.46	+0.2
3,426,901	-		PS417_15615	0.46	-0.7
3,426,901	-		PS417_15615	0.46	-0.3
3,426,901	-		PS417_15615	0.46	-0.0
3,427,000	+		PS417_15615	0.58	+1.1
3,427,167	-		PS417_15615	0.77	+0.2
3,427,302	+				+0.3
3,427,302	+				+0.5
3,427,302	+				-0.3
3,427,303	-				-1.6
3,427,303	-				-0.1
3,427,427	-				+0.2
3,427,451	+				-0.4
3,427,466	-				-0.1
3,427,526	+				-0.6
3,427,681	-		PS417_15620	0.17	+1.7
3,427,813	+		PS417_15620	0.31	+0.2
3,427,922	-		PS417_15620	0.43	+0.3
3,427,922	-		PS417_15620	0.43	+0.2
3,427,939	+		PS417_15620	0.44	+0.5
3,427,940	-		PS417_15620	0.45	+0.2
3,427,941	+		PS417_15620	0.45	-0.4
3,427,941	+		PS417_15620	0.45	+1.2
3,427,941	+		PS417_15620	0.45	+0.7
3,428,148	-		PS417_15620	0.67	-1.8
3,428,233	+				+1.2
3,428,234	-		PS417_15620	0.76	+0.2
3,428,314	+				-0.8
3,428,315	-		PS417_15620	0.85	-1.8
3,428,336	+		PS417_15620	0.87	+1.5
3,428,367	+				+0.7
3,428,536	-				+0.2
3,428,549	+				-3.3
3,428,702	+				-1.8
3,428,702	+				-0.4
3,428,703	-				-0.3
3,428,703	-				+0.3
3,428,703	-				-0.4
3,428,703	-				+0.5
3,428,703	-				-1.4
3,428,710	+				-1.1
3,428,710	+				-0.1
3,428,711	-				-0.1
3,428,712	+				+0.6
3,428,713	-				-0.8
3,428,767	+		PS417_15625	0.11	-0.6
3,428,768	-		PS417_15625	0.11	+0.0
3,428,802	+		PS417_15625	0.14	-1.8
3,428,802	+		PS417_15625	0.14	-0.9
3,428,803	-		PS417_15625	0.14	-0.4
3,428,803	-		PS417_15625	0.14	-0.0
3,429,092	+		PS417_15625	0.39	+0.2
3,429,092	+		PS417_15625	0.39	-0.5
3,429,184	+		PS417_15625	0.46	-2.7
3,429,185	-		PS417_15625	0.47	+0.2
3,429,417	+		PS417_15625	0.66	+0.5
3,429,418	-		PS417_15625	0.67	-0.8