Strain Fitness in Pseudomonas simiae WCS417 around PS417_15010

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
3,281,143	+				-0.8
3,281,144	-				-2.3
3,281,144	-				+0.3
3,281,144	-				+0.9
3,281,389	+				-2.0
3,281,389	+				+0.3
3,281,389	+				+0.2
3,281,390	-				-1.6
3,281,390	-				-0.2
3,281,530	+				-1.2
3,281,734	+				+1.2
3,281,845	-				+1.2
3,281,845	-		PS417_15005	0.81	+1.2
3,281,845	-		PS417_15005	0.81	-1.5
3,281,869	-		PS417_15005	0.86	+0.0
3,281,882	+		PS417_15005	0.89	-0.7
3,282,009	-				+0.7
3,282,079	-				+0.2
3,282,149	+		PS417_15010	0.11	+0.0
3,282,327	-		PS417_15010	0.41	-1.5
3,282,365	-		PS417_15010	0.48	-1.4
3,282,465	+		PS417_15010	0.64	-0.9
3,282,465	+		PS417_15010	0.64	+0.3
3,282,465	+		PS417_15010	0.64	-1.0
3,282,466	-		PS417_15010	0.65	-0.4
3,282,466	-		PS417_15010	0.65	+1.4
3,282,466	-		PS417_15010	0.65	-0.4
3,282,466	-		PS417_15010	0.65	-1.1
3,282,466	-		PS417_15010	0.65	+0.3
3,282,471	+		PS417_15010	0.65	-0.1
3,282,499	-		PS417_15010	0.70	-1.4
3,282,500	+		PS417_15010	0.70	+0.7
3,282,500	+		PS417_15010	0.70	-0.3
3,282,501	-		PS417_15010	0.71	-0.0
3,282,768	-				+0.4
3,282,822	-				-2.4
3,282,900	+				+1.0
3,282,903	-				+1.6
3,283,402	-				+0.4
3,283,402	-				-1.0
3,283,480	+				+0.8
3,283,481	-				+0.8
3,283,609	+		PS417_15020	0.18	+0.2