Strain Fitness in Pseudomonas simiae WCS417 around PS417_13350

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
2,934,311	+		PS417_13345	0.46	-0.5
2,934,586	+		PS417_13345	0.66	+0.4
2,934,586	+		PS417_13345	0.66	+0.4
2,934,735	-		PS417_13345	0.77	-0.1
2,935,434	-		PS417_13350	0.41	+2.2
2,935,540	+		PS417_13350	0.54	+0.5
2,935,541	-		PS417_13350	0.54	+0.4
2,935,777	+		PS417_13350	0.82	+0.7
2,935,778	-		PS417_13350	0.82	+0.3
2,935,796	+		PS417_13350	0.84	+0.4
2,935,796	+		PS417_13350	0.84	+0.1
2,935,797	-		PS417_13350	0.85	+0.1
2,935,996	+				-1.7
2,935,996	+				-0.7
2,935,996	+				+0.3
2,935,996	+				+0.0
2,935,996	+				-0.5
2,935,996	+				-0.1
2,935,996	+				-1.9
2,935,996	+				+2.7
2,935,997	-				+1.0
2,935,997	-				-0.3
2,935,997	-				+1.9
2,935,997	-				-0.3
2,935,998	+				+1.9
2,936,064	-		PS417_13355	0.20	+0.7
2,936,064	-		PS417_13355	0.20	+0.1
2,936,105	+		PS417_13355	0.31	-0.4
2,936,133	+		PS417_13355	0.38	-0.8
2,936,134	-				-0.5
2,936,297	+		PS417_13355	0.81	-1.0
2,936,297	+		PS417_13355	0.81	-1.9
2,936,297	+		PS417_13355	0.81	+2.1
2,936,298	-		PS417_13355	0.81	+0.1
2,936,306	-		PS417_13355	0.83	-1.0
2,936,334	+				+1.9
2,936,429	+				+0.1
2,936,429	+				+0.5
2,936,430	-				+2.0
2,936,430	-				+0.3
2,936,503	+				-2.0
2,936,503	+				+0.5
2,936,504	-				+1.1
2,936,611	+				+0.3
2,936,612	-				-1.7
2,936,720	+		PS417_13360	0.15	-1.2
2,936,721	-		PS417_13360	0.15	-1.1
2,936,722	+		PS417_13360	0.15	-0.1
2,936,722	+		PS417_13360	0.15	-0.3
2,936,722	+		PS417_13360	0.15	+0.5
2,936,723	-		PS417_13360	0.15	+0.3
2,936,723	-		PS417_13360	0.15	-0.5
2,936,723	-		PS417_13360	0.15	+0.4
2,936,723	-		PS417_13360	0.15	-1.3
2,936,723	-		PS417_13360	0.15	+0.5
2,936,723	-		PS417_13360	0.15	+0.5
2,936,723	-		PS417_13360	0.15	+0.5
2,936,726	+		PS417_13360	0.16	+0.3
2,936,726	+				+1.1
2,936,727	-		PS417_13360	0.16	+0.1
2,936,790	+		PS417_13360	0.29	-2.7
2,936,837	-		PS417_13360	0.39	-0.2
2,936,837	-		PS417_13360	0.39	+0.3
2,936,839	-		PS417_13360	0.39	+0.2
2,936,839	-		PS417_13360	0.39	+0.1
2,936,884	-		PS417_13360	0.49	+1.7
2,936,892	-		PS417_13360	0.50	+0.1
2,936,899	-		PS417_13360	0.52	-1.3