Strain Fitness in Pseudomonas simiae WCS417 around PS417_12595
Experiment: Gentamicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Gentamicin 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,742,276 | + | -2.1 | |||
| 2,742,276 | + | -0.5 | |||
| 2,742,277 | - | -2.2 | |||
| 2,742,292 | + | -0.3 | |||
| 2,742,292 | + | -2.7 | |||
| 2,742,293 | - | -1.4 | |||
| 2,742,293 | - | -1.7 | |||
| 2,742,293 | - | -0.5 | |||
| 2,742,293 | - | +2.1 | |||
| 2,742,295 | - | -1.7 | |||
| 2,742,361 | + | -0.4 | |||
| 2,742,757 | + | PS417_12595 | 0.42 | -1.3 | |
| 2,742,940 | + | PS417_12595 | 0.68 | -4.3 | |
| 2,743,132 | + | -1.9 | |||
| 2,743,228 | + | +6.7 | |||
| 2,743,327 | + | PS417_12600 | 0.12 | +6.7 |
Or see this region's nucleotide sequence