Strain Fitness in Pseudomonas simiae WCS417 around PS417_12500

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
2,716,384	+		PS417_12490	0.83	+0.2
2,716,384	+		PS417_12490	0.83	+0.5
2,716,384	+				+2.1
2,716,476	+				+1.4
2,716,476	+				-0.1
2,716,477	-				-0.9
2,716,794	+		PS417_12495	0.71	+0.3
2,716,794	+		PS417_12495	0.71	+1.8
2,716,794	+		PS417_12495	0.71	+1.7
2,716,795	-		PS417_12495	0.71	-1.7
2,716,795	-		PS417_12495	0.71	-0.4
2,716,808	+		PS417_12495	0.74	-1.2
2,716,809	-		PS417_12495	0.74	+0.4
2,716,809	-		PS417_12495	0.74	+0.0
2,716,892	+				+0.1
2,716,892	+				-0.4
2,716,893	-				-1.2
2,716,967	+				+0.4
2,716,968	-				-1.2
2,717,322	-				-0.8
2,717,378	+		PS417_12500	0.12	+0.7
2,717,379	-		PS417_12500	0.13	-1.2
2,717,571	-		PS417_12500	0.32	-0.5
2,717,673	-		PS417_12500	0.42	+0.1
2,717,673	-		PS417_12500	0.42	-0.4
2,717,817	+		PS417_12500	0.57	+0.1
2,717,818	-		PS417_12500	0.57	+0.1
2,717,818	-		PS417_12500	0.57	-0.4
2,717,819	+		PS417_12500	0.57	+0.4
2,717,819	+		PS417_12500	0.57	+0.6
2,717,820	-		PS417_12500	0.57	-0.9
2,717,820	-		PS417_12500	0.57	-0.4
2,717,909	+		PS417_12500	0.66	-1.6
2,717,910	-		PS417_12500	0.66	-0.5
2,717,993	+		PS417_12500	0.74	-1.8
2,718,275	+				+0.0
2,718,336	-				-1.1
2,718,391	+				+0.7
2,718,391	+				-1.7
2,718,391	+				-0.4
2,718,391	+				-1.1
2,718,392	-				+0.1
2,718,392	-				-1.4
2,718,484	+		PS417_12505	0.34	-0.6
2,718,485	-		PS417_12505	0.34	+0.6
2,718,528	-		PS417_12505	0.50	+1.1
2,718,605	+		PS417_12505	0.79	+0.6
2,718,605	+		PS417_12505	0.79	+0.9
2,718,606	-		PS417_12505	0.79	-1.4
2,718,606	-		PS417_12505	0.79	-0.2
2,718,719	-				-0.9
2,718,764	+				+0.4
2,718,764	+				-2.0
2,718,765	-				-0.2
2,718,842	+				+0.3
2,718,842	+				+1.5
2,718,843	-				+0.1
2,718,898	-				+0.2
2,718,998	+				-1.7
2,719,113	+				-0.4
2,719,113	+				+0.7
2,719,113	+				-0.9
2,719,113	+				-1.1
2,719,114	-				+3.1
2,719,114	-				+0.3
2,719,114	-				-0.0
2,719,114	-				-2.3
2,719,114	-				-1.0
2,719,114	-				+0.1
2,719,117	+				-2.2
2,719,117	+				-1.2
2,719,117	+				-0.0
2,719,118	-				-3.9
2,719,222	+				+0.2
2,719,222	+				+0.5
2,719,222	+				-1.2
2,719,222	+				-2.2