Strain Fitness in Pseudomonas simiae WCS417 around PS417_11935

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
2,595,754	-				-0.4
2,595,756	+				-0.1
2,595,757	-				+1.2
2,595,757	-				-3.4
2,595,799	+				+0.0
2,595,799	+				+0.5
2,595,800	-				-0.7
2,595,832	+				-1.7
2,595,942	+				+2.2
2,595,942	+				+1.3
2,595,942	+				+3.0
2,595,943	-				-1.4
2,595,943	-				-2.5
2,596,009	-				-2.1
2,596,087	-				-0.8
2,596,165	+		PS417_11930	0.19	-2.4
2,596,165	+		PS417_11930	0.19	-1.5
2,596,165	+		PS417_11930	0.19	-2.2
2,596,166	-				-0.4
2,596,191	+		PS417_11930	0.25	-2.6
2,596,191	+		PS417_11930	0.25	-1.6
2,596,191	+		PS417_11930	0.25	-3.2
2,596,192	-		PS417_11930	0.25	+0.8
2,596,192	-		PS417_11930	0.25	-1.0
2,596,192	-		PS417_11930	0.25	-1.7
2,596,195	+		PS417_11930	0.25	-1.2
2,596,195	+		PS417_11930	0.25	-1.2
2,596,195	+		PS417_11930	0.25	-0.2
2,596,196	-		PS417_11930	0.26	-1.8
2,596,196	-		PS417_11930	0.26	-1.5
2,596,363	+		PS417_11930	0.61	-2.8
2,596,544	-				-0.7
2,596,586	+				-2.7
2,596,587	-				-1.6
2,596,589	+				-0.7
2,596,589	+				-0.1
2,596,590	-				-2.3
2,596,605	+				-1.1
2,596,605	+				-0.9
2,596,609	+				-0.8
2,596,609	+				-1.5
2,596,610	-				-2.2
2,596,628	+				-2.0
2,596,629	-				+0.8
2,596,629	-				-0.6
2,596,862	-		PS417_11935	0.18	-1.2
2,597,000	-		PS417_11935	0.32	-0.7
2,597,223	-		PS417_11935	0.53	-2.1
2,597,240	+		PS417_11935	0.55	+1.0
2,597,240	+		PS417_11935	0.55	-0.5
2,597,241	-		PS417_11935	0.55	-1.1
2,597,241	-		PS417_11935	0.55	-1.1
2,597,241	-		PS417_11935	0.55	+0.8
2,597,324	+		PS417_11935	0.63	-0.4
2,597,324	+		PS417_11935	0.63	-0.1
2,597,324	+		PS417_11935	0.63	-0.3
2,597,325	-		PS417_11935	0.64	-3.1
2,597,327	+		PS417_11935	0.64	-0.2
2,597,693	+				+0.1
2,597,694	-				+0.2
2,597,707	+				+0.2
2,597,708	-				-1.1
2,597,708	-				-0.5
2,597,708	-				+0.2
2,597,712	+				+1.6
2,597,713	-				-0.6
2,597,713	-				-2.6
2,597,713	-				-0.7
2,597,742	+				+0.2
2,597,788	+				+0.1
2,597,836	+				-0.7
2,597,836	+				-1.9
2,597,836	+				-0.4
2,597,836	+				+0.9
2,597,836	+				-0.5
2,597,836	+				+1.7
2,597,837	-				+0.9
2,597,840	-				-0.0
2,597,840	-				+0.2
2,597,869	+				+1.2
2,597,869	+				-0.4
2,597,927	+				-1.0
2,597,928	-				+0.6
2,597,956	+				-1.0
2,597,957	-				-0.3
2,597,992	+				-0.9
2,597,992	+				-0.5
2,597,993	-				+2.1
2,597,993	-				-0.4
2,598,176	+		PS417_11940	0.18	-0.6
2,598,258	-		PS417_11940	0.22	+1.0
2,598,258	-		PS417_11940	0.22	+0.7
2,598,439	+		PS417_11940	0.31	+0.5
2,598,440	-		PS417_11940	0.31	-2.1
2,598,448	+		PS417_11940	0.31	-0.1
2,598,449	-		PS417_11940	0.31	-0.8
2,598,449	-		PS417_11940	0.31	-1.3
2,598,475	+		PS417_11940	0.32	-1.6
2,598,475	+		PS417_11940	0.32	+0.2
2,598,475	+		PS417_11940	0.32	+0.1
2,598,475	+		PS417_11940	0.32	+1.9