Strain Fitness in Pseudomonas simiae WCS417 around PS417_11905

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
2,591,889	-				+0.2
2,591,889	-				+0.5
2,591,914	-				-2.8
2,591,984	+				+2.2
2,591,984	+				+2.3
2,591,984	+				+2.2
2,591,985	-				-3.1
2,591,985	-				-0.4
2,591,985	-				-0.1
2,591,985	-				-1.1
2,591,985	-				-1.1
2,591,985	-				-1.0
2,591,985	-				-2.7
2,591,985	-				-1.1
2,591,985	-				+0.6
2,591,986	+				-0.9
2,591,987	-				-3.1
2,591,987	-				-2.0
2,591,988	+				+1.8
2,591,988	+				+1.8
2,591,989	-				-1.5
2,591,989	-				-2.4
2,591,989	-				-0.4
2,591,989	-				-3.0
2,591,989	-				-1.7
2,591,989	-				-1.6
2,592,015	-				-1.1
2,592,017	-				-2.3
2,592,121	-				-1.9
2,592,290	+				-2.4
2,592,290	+				-1.1
2,592,290	+				-1.4
2,592,290	+				-2.1
2,592,291	-				-1.1
2,592,291	-				-1.4
2,592,291	-				-1.1
2,592,442	+		PS417_11900	0.47	-1.3
2,592,511	+		PS417_11900	0.64	-1.5
2,592,512	-		PS417_11900	0.64	-2.6
2,592,596	+		PS417_11900	0.85	-2.3
2,592,597	-		PS417_11900	0.85	-1.2
2,592,741	-				-1.8
2,592,775	+				-1.4
2,592,775	+				-2.3
2,592,960	-				-2.5
2,593,079	+		PS417_11905	0.15	+1.5
2,593,079	+		PS417_11905	0.15	-1.4
2,593,080	-		PS417_11905	0.15	-2.3
2,593,198	-		PS417_11905	0.23	-1.5
2,593,653	+		PS417_11905	0.51	-0.2
2,593,922	+		PS417_11905	0.68	+1.2
2,593,922	+		PS417_11905	0.68	+0.1
2,593,922	+		PS417_11905	0.68	-0.2
2,593,923	-		PS417_11905	0.68	-2.2
2,593,923	-		PS417_11905	0.68	-1.1
2,593,923	-		PS417_11905	0.68	-2.3
2,593,923	-		PS417_11905	0.68	-2.2
2,594,021	+		PS417_11905	0.74	-0.5
2,594,021	+		PS417_11905	0.74	+0.6
2,594,054	+		PS417_11905	0.76	-0.4
2,594,055	-		PS417_11905	0.76	-1.3
2,594,165	+		PS417_11905	0.83	+1.8
2,594,166	-		PS417_11905	0.83	-0.9
2,594,312	+				-1.0
2,594,312	+				+0.6
2,594,313	-				+2.4
2,594,313	-				-1.4
2,594,313	-				+0.4
2,594,399	+				+0.3
2,594,400	-				-2.8
2,594,400	-				-0.2
2,594,459	+				+1.1
2,594,528	-				-1.4
2,594,759	-				-0.8
2,595,061	-				-1.1
2,595,294	+				+3.3
2,595,314	-				-1.5
2,595,400	+				-1.4
2,595,400	+				-0.1
2,595,401	-				-1.4
2,595,401	-				-0.4
2,595,406	-				-0.6