Strain Fitness in Pseudomonas simiae WCS417 around PS417_10800

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
2,306,717	+				+1.6
2,306,718	-				+5.1
2,306,837	+				-0.6
2,306,860	-				+1.1
2,306,915	+				+2.7
2,306,915	+				-1.6
2,306,927	+				+0.8
2,307,043	+				-0.1
2,307,043	+				-0.4
2,307,051	-				+0.9
2,307,051	-				+1.1
2,307,220	-				+0.7
2,307,273	-				-0.3
2,307,302	-		PS417_10800	0.12	+1.2
2,307,302	-		PS417_10800	0.12	+0.1
2,307,338	-		PS417_10800	0.16	+1.1
2,307,408	-		PS417_10800	0.24	+1.4
2,307,722	-		PS417_10800	0.58	+0.7
2,308,138	-				+1.2
2,308,138	-				+0.2
2,308,141	+				+1.1
2,308,141	+				-1.4
2,308,142	-				+0.6
2,308,142	-				-2.0
2,308,142	-				-0.3
2,308,142	-				+0.1
2,308,270	+				+0.8
2,308,270	+				-0.4
2,308,270	+				+0.6
2,308,270	+				+1.0
2,308,271	-				-2.4
2,308,271	-				+2.4
2,308,400	+				-0.3
2,308,401	-				+0.2
2,308,405	-				+1.9
2,308,405	-				-0.1
2,308,431	+				+0.5
2,308,431	+				+0.8
2,308,476	+				-3.3
2,308,477	-				+0.3
2,308,477	-				+0.6
2,308,480	+				-3.6
2,308,480	+				+0.8
2,308,481	-				+1.2
2,308,481	-				+0.9
2,308,581	+				+0.5
2,308,582	-				-0.2
2,308,678	-				-0.0
2,308,681	+				-2.3
2,308,681	+				+3.2
2,308,681	+				+0.2
2,308,682	-				-2.4
2,308,831	-				-0.3
2,308,831	-				+0.5
2,308,987	-		PS417_10805	0.14	+0.8
2,308,987	-		PS417_10805	0.14	+0.7
2,308,987	-		PS417_10805	0.14	-1.1