Strain Fitness in Pseudomonas simiae WCS417 around PS417_10670
Experiment: Gentamicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Gentamicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,278,484 | + | -1.9 | |||
2,278,846 | - | +0.4 | |||
2,278,860 | + | -3.1 | |||
2,278,884 | - | +1.7 | |||
2,278,884 | - | -0.4 | |||
2,279,174 | + | PS417_10665 | 0.55 | +0.6 | |
2,279,175 | - | PS417_10665 | 0.55 | +0.2 | |
2,279,633 | + | PS417_10670 | 0.33 | -0.7 | |
2,279,633 | + | PS417_10670 | 0.33 | -0.8 | |
2,279,633 | + | PS417_10670 | 0.33 | -0.9 | |
2,279,634 | - | PS417_10670 | 0.33 | -0.5 | |
2,279,634 | - | PS417_10670 | 0.33 | +0.3 | |
2,279,897 | + | PS417_10670 | 0.65 | -3.4 | |
2,280,050 | + | PS417_10670 | 0.84 | -0.0 | |
2,280,316 | - | +0.0 | |||
2,280,397 | + | -0.4 | |||
2,280,398 | - | +0.3 | |||
2,280,836 | - | PS417_10675 | 0.63 | -1.2 |
Or see this region's nucleotide sequence