Strain Fitness in Pseudomonas simiae WCS417 around PS417_10660

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
2,274,308	-				+1.2
2,274,341	+				-0.6
2,274,357	-				+0.8
2,274,417	+				-1.0
2,274,417	+				-2.5
2,274,431	+				-0.8
2,274,450	+				+1.8
2,274,450	+				+0.7
2,274,451	-				-0.5
2,274,451	-				-1.5
2,274,451	-				-0.8
2,274,454	-				-0.7
2,274,459	+				-0.8
2,274,460	-				+1.3
2,274,460	-				-0.3
2,274,513	+				-0.4
2,274,513	+				-2.0
2,274,517	+				+1.2
2,274,518	-				-0.4
2,274,518	-				+0.2
2,274,518	-				-0.2
2,274,518	-				-0.8
2,274,531	+				-1.9
2,274,535	+				-0.4
2,274,535	+				+0.0
2,274,535	+				+0.2
2,274,535	+				-0.4
2,274,535	+				-1.1
2,274,535	+				+0.3
2,274,536	-				+0.2
2,274,541	+				-0.4
2,274,541	+				-0.0
2,274,562	+				-4.0
2,274,576	+				+1.1
2,274,576	+				+1.6
2,274,599	-				+0.4
2,274,617	+				-0.6
2,274,618	-				+1.9
2,275,057	+		PS417_10655	0.79	+0.6
2,275,075	+		PS417_10655	0.82	+1.5
2,275,106	+		PS417_10655	0.87	-0.8
2,275,107	-		PS417_10655	0.87	-2.3
2,275,282	+				+0.2
2,275,449	+				+0.3
2,275,474	+				-0.1
2,275,501	-				-0.0
2,275,612	-		PS417_10660	0.12	-0.8
2,275,660	+		PS417_10660	0.13	-0.6
2,275,707	+		PS417_10660	0.14	+0.0
2,275,707	+		PS417_10660	0.14	-0.2
2,275,708	-		PS417_10660	0.14	-0.4
2,275,708	-		PS417_10660	0.14	-0.4
2,275,734	+		PS417_10660	0.15	-1.1
2,275,762	-		PS417_10660	0.16	+2.8
2,275,868	+		PS417_10660	0.19	+1.6
2,275,872	-		PS417_10660	0.19	-0.1
2,275,953	-		PS417_10660	0.21	-2.3
2,276,144	-				+1.8
2,276,182	+		PS417_10660	0.27	-1.8
2,276,182	+		PS417_10660	0.27	+1.2
2,276,183	-		PS417_10660	0.27	+0.0
2,276,344	-		PS417_10660	0.32	-0.2
2,276,344	-				+0.8
2,276,344	-		PS417_10660	0.32	+0.2
2,276,358	+		PS417_10660	0.32	+0.3
2,276,358	+		PS417_10660	0.32	-0.5
2,276,552	+		PS417_10660	0.38	+1.0
2,276,552	+		PS417_10660	0.38	-1.1
2,276,552	+		PS417_10660	0.38	+0.5
2,276,553	-				-0.4
2,276,553	-		PS417_10660	0.38	+0.2
2,276,862	+		PS417_10660	0.46	-1.1
2,276,964	+		PS417_10660	0.49	-0.7
2,276,965	-		PS417_10660	0.49	+0.6
2,277,192	+		PS417_10660	0.55	+0.8
2,277,193	-		PS417_10660	0.55	+0.4
2,277,720	-		PS417_10660	0.70	-1.3
2,278,041	+		PS417_10660	0.79	+0.9
2,278,124	-		PS417_10660	0.81	+0.1
2,278,256	+		PS417_10660	0.85	-1.6
2,278,256	+		PS417_10660	0.85	+0.0
2,278,256	+		PS417_10660	0.85	-1.8
2,278,257	-		PS417_10660	0.85	-0.8
2,278,257	-		PS417_10660	0.85	+0.2
2,278,257	-		PS417_10660	0.85	-0.6
2,278,257	-		PS417_10660	0.85	+0.4
2,278,257	-		PS417_10660	0.85	-0.6
2,278,257	-		PS417_10660	0.85	-1.4
2,278,257	-		PS417_10660	0.85	+1.6
2,278,272	-		PS417_10660	0.85	+0.3
2,278,484	+				-1.9
2,278,846	-				+0.4
2,278,860	+				-3.1
2,278,884	-				+1.7
2,278,884	-				-0.4
2,279,174	+		PS417_10665	0.55	+0.6
2,279,175	-		PS417_10665	0.55	+0.2
2,279,633	+		PS417_10670	0.33	-0.7
2,279,633	+		PS417_10670	0.33	-0.8
2,279,633	+		PS417_10670	0.33	-0.9
2,279,634	-		PS417_10670	0.33	-0.5
2,279,634	-		PS417_10670	0.33	+0.3