Strain Fitness in Pseudomonas simiae WCS417 around PS417_09295

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
2,015,640	+		PS417_09290	0.25	-1.1
2,015,641	-		PS417_09290	0.25	-2.2
2,015,948	-		PS417_09290	0.51	-0.0
2,015,955	+		PS417_09290	0.52	+1.5
2,015,955	+		PS417_09290	0.52	-0.8
2,016,432	+				+1.2
2,016,433	-				-0.2
2,016,545	+				-1.1
2,016,727	-		PS417_09295	0.12	+1.7
2,016,742	+				-0.3
2,016,743	-		PS417_09295	0.13	-0.7
2,016,744	+				+3.2
2,016,745	-		PS417_09295	0.13	-0.1
2,016,745	-		PS417_09295	0.13	+0.7
2,016,745	-		PS417_09295	0.13	+0.3
2,016,787	-		PS417_09295	0.15	+0.8
2,016,856	+		PS417_09295	0.19	-0.8
2,016,857	-		PS417_09295	0.19	+1.7
2,016,858	+		PS417_09295	0.19	+0.7
2,016,858	+		PS417_09295	0.19	+0.4
2,016,858	+		PS417_09295	0.19	+0.3
2,016,858	+		PS417_09295	0.19	-2.0
2,016,859	-		PS417_09295	0.19	-0.1
2,016,859	-		PS417_09295	0.19	-1.8
2,016,859	-		PS417_09295	0.19	-2.2
2,016,859	-		PS417_09295	0.19	-1.0
2,017,140	+		PS417_09295	0.35	-2.3
2,017,725	+		PS417_09295	0.67	+0.2
2,017,729	+		PS417_09295	0.67	+0.1
2,017,729	+		PS417_09295	0.67	-0.6
2,017,776	+		PS417_09295	0.70	+0.4
2,017,777	-		PS417_09295	0.70	-2.3
2,017,777	-		PS417_09295	0.70	-0.6
2,017,777	-		PS417_09295	0.70	+0.2
2,017,777	-		PS417_09295	0.70	+0.4
2,017,779	+		PS417_09295	0.70	-0.4
2,017,779	+		PS417_09295	0.70	-1.7
2,017,779	+		PS417_09295	0.70	+0.7
2,017,780	-		PS417_09295	0.70	-1.0
2,017,900	-		PS417_09295	0.77	-0.1
2,017,900	-		PS417_09295	0.77	+0.9
2,018,059	-		PS417_09295	0.86	-1.4
2,018,160	+				-2.6
2,018,197	-				-0.9
2,018,221	-				+1.7
2,018,221	-				+0.2
2,018,247	+				+0.2
2,018,248	-				+1.2
2,018,248	-				+1.1
2,018,282	+				+0.9
2,018,283	-				-0.9
2,018,285	+				-1.9
2,018,286	-				+1.2
2,018,286	-				-1.9
2,018,364	-				-0.1
2,018,407	-				-0.3
2,018,460	+				+0.5
2,018,960	+		PS417_09300	0.52	-2.2
2,019,164	+		PS417_09300	0.80	+0.6
2,019,164	+		PS417_09300	0.80	-2.9
2,019,165	-		PS417_09300	0.80	-1.7
2,019,271	+				-2.6
2,019,309	-				-1.0